Resource

Id Histone_ChIP-seq/ENCSR181HTEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR181HTE [biosample_summary="Homo sapiens sigmoid colon tissue male adult (37 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR181HTE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001159/
  • biosample_summary: Homo sapiens sigmoid colon tissue male adult (37 years)
  • date_created: 2019-04-27T23:30:17.648771+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR181HTE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR181HTE float

Histone_ChIP-seq_ENCSR181HTE
Histone_ChIP-seq ENCSR181HTE [biosample_summary="Homo sapiens sigmoid colon tissue male adult (37 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR181HTE [1.67, 13.8]
n
187,049,253
mean
4.65
sd
1.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1870492535.81% 126102
chr1 18259111 7.33% 11844
chr2 15635042 6.46% 10488
chr3 13603328 6.86% 9046
chr4 9158384 4.81% 6528
chr5 9870647 5.44% 6843
chr6 10086677 5.91% 7289
chr7 9475208 5.95% 6708
chr8 7955374 5.48% 5643
chr9 8888671 6.42% 5604
chr10 10859094 8.12% 6858
chr11 9649268 7.14% 6152
chr12 9679613 7.26% 6390
chr13 4915198 4.30% 3348
chr14 6358077 5.94% 4130
chr15 6378498 6.25% 4277
chr16 5977221 6.62% 4016
chr17 8119808 9.75% 5132
chr18 3792280 4.72% 2667
chr19 5370972 9.16% 3770
chr20 4985808 7.74% 3305
chr21 1966604 4.21% 1406
chr22 3774890 7.43% 2409
chrX 2203180 1.41% 2155
chrY 86300 0.15% 94
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 126102 220 43907 1483.32 1073
global segment-length histogram

Files

Filename Size md5
ENCFF052XGA.bed.gz 3.08 MB cffc86f770a9d4872f61374c29be760e
ENCFF052XGA.tabix.bed.gz 1.34 MB 02398dcfd71c7983b2c6d5e1309d82ce
ENCFF052XGA.tabix.bed.gz.tbi 338.77 KB 80f871d08352021cee12ae84b1bdf56e
genomic_resource.yaml 1.72 KB d589e80fad6ec7f48c6e7165932bcf4f
statistics/