Resource

Id Histone_ChIP-seq/ENCSR179GVPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR179GVP [biosample_summary="Homo sapiens pancreas tissue female adult (59 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR179GVP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001264/
  • biosample_summary: Homo sapiens pancreas tissue female adult (59 years)
  • date_created: 2021-01-28T22:02:00.275898+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR179GVP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR179GVP float

Histone_ChIP-seq_ENCSR179GVP
Histone_ChIP-seq ENCSR179GVP [biosample_summary="Homo sapiens pancreas tissue female adult (59 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR179GVP [1.67, 4.55]
n
2,321,558
mean
2.68
sd
0.39

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 23215580.07% 4634
chr1 125324 0.05% 255
chr2 150978 0.06% 302
chr3 120895 0.06% 247
chr4 155313 0.08% 338
chr5 143002 0.08% 279
chr6 203206 0.12% 387
chr7 142460 0.09% 254
chr8 109998 0.08% 233
chr9 71237 0.05% 133
chr10 86273 0.06% 173
chr11 74163 0.05% 154
chr12 76948 0.06% 162
chr13 93657 0.08% 186
chr14 67159 0.06% 111
chr15 70082 0.07% 134
chr16 21432 0.02% 47
chr17 52745 0.06% 89
chr18 42656 0.05% 94
chr19 17439 0.03% 35
chr20 34694 0.05% 66
chr21 28584 0.06% 62
chr22 11996 0.02% 24
chrX 421317 0.27% 869
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 4634 235 4164 500.98 432
global segment-length histogram

Files

Filename Size md5
ENCFF479SPJ.bed.gz 88.96 KB c4e2519f060440f56cda2e671f9aaf77
ENCFF479SPJ.tabix.bed.gz 49.0 KB 86f135b8071520c26b630fd1bb4a738b
ENCFF479SPJ.tabix.bed.gz.tbi 43.18 KB 9f862f4ee73c9ecbf7a704caa06667aa
genomic_resource.yaml 1.5 KB 504bd0afc5d9d40aa9491df98f171874
statistics/