Resource

Id Histone_ChIP-seq/ENCSR177QFYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR177QFY [biosample_summary="Homo sapiens adrenal gland tissue male adult (54 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR177QFY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002369/
  • biosample_summary: Homo sapiens adrenal gland tissue male adult (54 years)
  • date_created: 2016-03-19T00:36:09.974799+00:00
  • date_released: 2016-10-24
  • doi: 10.17989/ENCSR177QFY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR177QFY float

Histone_ChIP-seq_ENCSR177QFY
Histone_ChIP-seq ENCSR177QFY [biosample_summary="Homo sapiens adrenal gland tissue male adult (54 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR177QFY [1.38, 31.8]
n
39,773,376
mean
6.62
sd
4.17

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 397733761.24% 37956
chr1 4006335 1.61% 3741
chr2 3022802 1.25% 2884
chr3 2309055 1.16% 2296
chr4 1287021 0.68% 1308
chr5 1838995 1.01% 1767
chr6 1920176 1.12% 1853
chr7 1748071 1.10% 1752
chr8 1575841 1.09% 1519
chr9 1821955 1.32% 1770
chr10 1934664 1.45% 1883
chr11 2271607 1.68% 2064
chr12 2262711 1.70% 2096
chr13 743319 0.65% 772
chr14 1244294 1.16% 1201
chr15 1292312 1.27% 1249
chr16 1570408 1.74% 1544
chr17 2390528 2.87% 2121
chr18 702347 0.87% 699
chr19 2284391 3.90% 2042
chr20 1192847 1.85% 1116
chr21 427541 0.92% 418
chr22 1122515 2.21% 1025
chrM 10388 62.70% 4
chrUn_GL000218v1 414 0.26% 1
chrUn_GL000219v1 1463 0.82% 2
chrUn_KI270337v1 704 62.80% 1
chrUn_KI270438v1 1010 0.90% 2
chrUn_KI270466v1 966 78.35% 2
chrUn_KI270467v1 1630 41.58% 1
chrX 763102 0.49% 804
chrY 23964 0.04% 19
3335 contigs with no values (128601392 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 37956 255 17701 1047.88 762
global segment-length histogram

Files

Filename Size md5
ENCFF985YQH.bed.gz 954.47 KB 355a2cd891559703350eab5d233785c3
ENCFF985YQH.tabix.bed.gz 421.36 KB 9262b8ee1ab0900bebb92f4c61f6e012
ENCFF985YQH.tabix.bed.gz.tbi 168.64 KB dec4fdcd83677622d4d20a0ac7adf748
genomic_resource.yaml 1.5 KB 94eb13b9694e6e0baa4c7b2ba315f5d1
statistics/