| Id: | Histone_ChIP-seq/ENCSR169BGF |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR169BGF [biosamplesummary="Homo sapiens neuronal stem cell originated from H9" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 2 summary: female embryo (5 days) output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN148FEF|/analyses/ENCAN148FEF/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_internal_action: Released analysis {ENCAN148FEF|/analyses/ENCAN148FEF/} has in progress subobject document {1394531c-3edd-40fe-a768-02190ec0dc57|/documents/1394531c-3edd-40fe-a768-02190ec0dc57/} audit_not_compliant: Processed alignments file {ENCFF800MEZ|/files/ENCFF800MEZ/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 25995841 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR169BGF | float |
Histone_ChIP-seq_ENCSR169BGF |
Histone_ChIP-seq ENCSR169BGF [biosample_summary="Homo sapiens neuronal stem cell originated from H9" and target="H3K4me1"]
|
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[1.83, 18.1] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF588LNM.bed.gz | 2.49 MB | ffeb9519039d32f08011dddd4be628fa |
| ENCFF588LNM.bed.gz.dvc | 101.0 B | b96c9654b2285a983245e017d00019a4 |
| ENCFF588LNM.tabix.bed.gz | 1.19 MB | dd1c70fe2da20937703014e9e4873ecb |
| ENCFF588LNM.tabix.bed.gz.dvc | 107.0 B | d1877ee8515f94ac84b5717ecb0202b0 |
| ENCFF588LNM.tabix.bed.gz.tbi | 363.09 KB | 806c89adfd072caf60c3c769d62b56b7 |
| ENCFF588LNM.tabix.bed.gz.tbi.dvc | 110.0 B | a05a6140f5e5d3a3043c9120dd3e206d |
| genomic_resource.yaml | 2.4 KB | 69b8f8452ac5d94ac1d33bfd2d376c37 |
| genomic_resource_original.yaml | 2.27 KB | 2515c8ba0cfc961940539eba02ddeac3 |
| statistics/ |