Resource

Id Histone_ChIP-seq/ENCSR166ZZZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR166ZZZ [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell male adult (28 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR166ZZZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000625/
  • biosample_summary: Homo sapiens CD8-positive, alpha-beta T cell male adult (28 years)
  • date_created: 2015-09-15T20:26:25.625472+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR166ZZZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (28 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR166ZZZ float

Histone_ChIP-seq_ENCSR166ZZZ
Histone_ChIP-seq ENCSR166ZZZ [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell male adult (28 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR166ZZZ [1.25, 5.96]
n
910,523
mean
2
sd
0.664

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 9105230.03% 2852
chr1 91315 0.04% 279
chr2 67329 0.03% 217
chr3 54856 0.03% 165
chr4 39653 0.02% 126
chr5 48672 0.03% 144
chr6 62743 0.04% 190
chr7 47182 0.03% 152
chr8 32324 0.02% 101
chr9 29772 0.02% 98
chr10 30268 0.02% 94
chr11 44471 0.03% 146
chr12 60339 0.05% 184
chr13 19215 0.02% 64
chr14 37581 0.04% 114
chr15 26629 0.03% 85
chr16 28127 0.03% 91
chr17 56399 0.07% 178
chr18 13577 0.02% 42
chr19 55307 0.09% 177
chr20 19082 0.03% 64
chr21 5939 0.01% 20
chr22 18214 0.04% 58
chrX 20428 0.01% 60
chrY 1101 <0.01% 3
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 2852 170 1325 319.26 297.5
global segment-length histogram

Files

Filename Size md5
ENCFF306UVO.bed.gz 73.61 KB 518e1a8a929c1e141bd7c852eff0229e
ENCFF306UVO.tabix.bed.gz 32.06 KB 9c4c9f70b9234d2848cfba6fe1c4fa94
ENCFF306UVO.tabix.bed.gz.tbi 31.63 KB ab5a7fded0210c068a78ad09312c8529
genomic_resource.yaml 1.54 KB 78441d481465368f5bbeceed71bfac17
statistics/