Resource

Id Histone_ChIP-seq/ENCSR166WJUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR166WJU [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (78 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR166WJU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (78 years)
  • date_created: 2021-01-28T04:10:53.868038+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR166WJU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (78 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR166WJU float

Histone_ChIP-seq_ENCSR166WJU
Histone_ChIP-seq ENCSR166WJU [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (78 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR166WJU [1.54, 10.5]
n
22,701,651
mean
4.36
sd
1.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 227016510.71% 36817
chr1 1055372 0.42% 1420
chr2 1079533 0.45% 1369
chr3 388979 0.20% 533
chr4 645381 0.34% 753
chr5 826981 0.46% 995
chr6 1203120 0.70% 1321
chr7 823974 0.52% 861
chr8 583678 0.40% 811
chr9 497835 0.36% 620
chr10 839614 0.63% 1135
chr11 454394 0.34% 657
chr12 679927 0.51% 853
chr13 362100 0.32% 465
chr14 654837 0.61% 952
chr15 508274 0.50% 718
chr16 606036 0.67% 966
chr17 858673 1.03% 1000
chr18 273304 0.34% 387
chr19 585327 1.00% 936
chr20 501719 0.78% 772
chr21 273130 0.58% 447
chr22 217197 0.43% 401
chrX 8782266 5.63% 18445
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 36817 180 23471 616.61 413
global segment-length histogram

Files

Filename Size md5
ENCFF729EZH.bed.gz 637.51 KB 9de935778edbad0f511db0a9c216cbf6
ENCFF729EZH.tabix.bed.gz 341.24 KB 1c46154e8765141ae159ec8e3dedf262
ENCFF729EZH.tabix.bed.gz.tbi 119.63 KB 88225a76c60a514ac1ad6f9aef0d68ea
genomic_resource.yaml 1.57 KB 65d7ed51f8ed1cea64504571333bb8d8
statistics/