Resource

Id Histone_ChIP-seq/ENCSR165CDYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR165CDY [biosample_summary="Homo sapiens left ventricle myocardium inferior tissue male adult (60 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR165CDY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_NTR_0000493/
  • biosample_summary: Homo sapiens left ventricle myocardium inferior tissue male adult (60 years)
  • date_created: 2021-01-28T22:02:15.226452+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR165CDY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (60 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR165CDY float

Histone_ChIP-seq_ENCSR165CDY
Histone_ChIP-seq ENCSR165CDY [biosample_summary="Homo sapiens left ventricle myocardium inferior tissue male adult (60 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR165CDY [1.63, 89.3]
n
186,544,989
mean
16.7
sd
14.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1865449895.80% 96207
chr1 18189087 7.31% 9102
chr2 14511555 5.99% 7801
chr3 12911954 6.51% 6437
chr4 8252889 4.34% 4427
chr5 10264743 5.65% 5334
chr6 10635580 6.23% 5682
chr7 8787086 5.51% 4829
chr8 8341018 5.75% 4445
chr9 8188957 5.92% 4188
chr10 10373317 7.75% 5056
chr11 9010257 6.67% 4648
chr12 9802110 7.35% 4854
chr13 4701610 4.11% 2569
chr14 5893467 5.51% 2978
chr15 6787586 6.66% 3466
chr16 5940775 6.58% 3118
chr17 8887742 10.68% 4241
chr18 3918261 4.88% 2081
chr19 6156155 10.50% 2994
chr20 5025571 7.80% 2465
chr21 1956136 4.19% 1148
chr22 4413530 8.68% 1994
chrX 3479482 2.23% 2273
chrY 116121 0.20% 77
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 96207 215 68745 1939 1253
global segment-length histogram

Files

Filename Size md5
ENCFF340SAM.bed.gz 2.47 MB d1526e444428482cfcc31ca9dde2508f
ENCFF340SAM.tabix.bed.gz 1.05 MB aa50859315dd4a0f8b88b12bf91113da
ENCFF340SAM.tabix.bed.gz.tbi 276.64 KB 2ace4c8b3841ae92a084b4a0f1092bd0
genomic_resource.yaml 1.57 KB 27355596f9256bdf96bfc76d80cbc02a
statistics/