Resource

Id Histone_ChIP-seq/ENCSR162MGRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR162MGR [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (32 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR162MGR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_2000001/
  • biosample_summary: Homo sapiens peripheral blood mononuclear cell male adult (32 years)
  • date_created: 2015-09-15T20:26:53.155768+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR162MGR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (32 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR162MGR float

Histone_ChIP-seq_ENCSR162MGR
Histone_ChIP-seq ENCSR162MGR [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (32 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR162MGR [1.88, 19]
n
83,724,302
mean
6.1
sd
2.41

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 837243022.60% 97665
chr1 8074869 3.24% 9559
chr2 5647863 2.33% 7531
chr3 4545068 2.29% 5850
chr4 2438598 1.28% 3266
chr5 3644563 2.01% 4814
chr6 3225052 1.89% 4245
chr7 4000476 2.51% 4763
chr8 2579036 1.78% 3411
chr9 3568579 2.58% 4042
chr10 3263687 2.44% 4226
chr11 4422883 3.27% 4868
chr12 4682390 3.51% 5384
chr13 1384805 1.21% 2022
chr14 2823985 2.64% 3545
chr15 2737590 2.68% 3561
chr16 5004874 5.54% 4922
chr17 5976653 7.18% 6099
chr18 1158479 1.44% 1597
chr19 6484215 11.06% 5264
chr20 2862669 4.44% 3162
chr21 1193880 2.56% 1321
chr22 3090108 6.08% 2799
chrX 878157 0.56% 1342
chrY 35823 0.06% 72
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 97665 205 21853 857.26 595
global segment-length histogram

Files

Filename Size md5
ENCFF804GFA.bed.gz 1.82 MB 195ce9a4a882cc76cdb9fc38046a6b2d
ENCFF804GFA.tabix.bed.gz 945.6 KB 7078d789d7dc0182486742d9c7289a76
ENCFF804GFA.tabix.bed.gz.tbi 159.96 KB 9c5972c1903b3faa5e4d06cd4dc7dd80
genomic_resource.yaml 2.05 KB b08099f7233f1e3d8f10a43ca576bf54
statistics/