Resource

Id Histone_ChIP-seq/ENCSR156XNCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR156XNC [biosample_summary="Homo sapiens peripheral blood mononuclear cell female adult (28 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR156XNC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_2000001/
  • biosample_summary: Homo sapiens peripheral blood mononuclear cell female adult (28 years)
  • date_created: 2015-09-15T20:26:47.246435+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR156XNC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (28 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR156XNC float

Histone_ChIP-seq_ENCSR156XNC
Histone_ChIP-seq ENCSR156XNC [biosample_summary="Homo sapiens peripheral blood mononuclear cell female adult (28 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR156XNC [1.37, 30.1]
n
26,723,951
mean
7.16
sd
3.49

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 267239510.83% 33205
chr1 2735687 1.10% 3340
chr2 2084709 0.86% 2510
chr3 1533445 0.77% 1974
chr4 821368 0.43% 1060
chr5 1283825 0.71% 1613
chr6 1521195 0.89% 1905
chr7 1162409 0.73% 1445
chr8 866054 0.60% 1143
chr9 1020611 0.74% 1283
chr10 1178327 0.88% 1489
chr11 1520027 1.13% 1788
chr12 1393898 1.05% 1674
chr13 570756 0.50% 711
chr14 1116524 1.04% 1320
chr15 850147 0.83% 1079
chr16 1061008 1.17% 1372
chr17 1672919 2.01% 2050
chr18 397024 0.49% 522
chr19 1572930 2.68% 1893
chr20 736828 1.14% 934
chr21 341405 0.73% 422
chr22 779899 1.53% 934
chrX 502956 0.32% 744
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 33205 180 11334 804.82 616
global segment-length histogram

Files

Filename Size md5
ENCFF540CVX.bed.gz 702.9 KB 7f0b716a347e0a7bb19349ae25a0de75
ENCFF540CVX.tabix.bed.gz 342.75 KB 10c7c4f58e0dbd406de9639892e37cda
ENCFF540CVX.tabix.bed.gz.tbi 141.8 KB b4bea30c3145ff0dba75f453646a0f1b
genomic_resource.yaml 1.56 KB 99716a13ca3ac2d9071be8b348b3cbb0
statistics/