Resource

Id Histone_ChIP-seq/ENCSR153AXQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR153AXQ [biosample_summary="Homo sapiens esophagus squamous epithelium tissue male adult (37 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR153AXQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006920/
  • biosample_summary: Homo sapiens esophagus squamous epithelium tissue male adult (37 years)
  • date_created: 2018-04-26T17:33:21.473633+00:00
  • date_released: 2019-08-01
  • doi: 10.17989/ENCSR153AXQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR153AXQ float

Histone_ChIP-seq_ENCSR153AXQ
Histone_ChIP-seq ENCSR153AXQ [biosample_summary="Homo sapiens esophagus squamous epithelium tissue male adult (37 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR153AXQ [1.29, 16.2]
n
62,298,907
mean
4.46
sd
2.03

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 622989071.94% 51959
chr1 3666866 1.47% 3381
chr2 4360948 1.80% 4266
chr3 3418394 1.72% 3241
chr4 3770860 1.98% 3507
chr5 4243672 2.34% 3628
chr6 3026856 1.77% 2928
chr7 4495243 2.82% 3494
chr8 3270751 2.25% 2956
chr9 1903275 1.38% 1671
chr10 2881170 2.15% 2490
chr11 3026044 2.24% 2627
chr12 3212147 2.41% 2481
chr13 1934859 1.69% 1989
chr14 1708469 1.60% 1665
chr15 1513167 1.48% 1264
chr16 1688472 1.87% 1274
chr17 994679 1.19% 857
chr18 1306112 1.63% 1277
chr19 8308272 14.17% 3704
chr20 823411 1.28% 748
chr21 1414303 3.03% 1169
chr22 484027 0.95% 419
chrX 637986 0.41% 726
chrY 208924 0.37% 197
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 51959 270 90502 1199 853
global segment-length histogram

Files

Filename Size md5
ENCFF164KXT.bed.gz 1.08 MB 7d26b0c118b9fa86daec3b045bf516b8
ENCFF164KXT.tabix.bed.gz 541.89 KB 7cf7e17fec4f3ed529b622e7151f364a
ENCFF164KXT.tabix.bed.gz.tbi 242.72 KB 217475e79af7b635c5a8a17ebd08cd7a
genomic_resource.yaml 1.56 KB 787fa859efc9de0b2c3fd3df9f0a1939
statistics/