Resource

Id Histone_ChIP-seq/ENCSR149XIHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR149XIH [biosample_summary="Homo sapiens duodenal mucosa tissue male adult (76 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR149XIH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000320/
  • biosample_summary: Homo sapiens duodenal mucosa tissue male adult (76 years)
  • date_created: 2015-09-15T19:51:48.727662+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR149XIH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (76 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR149XIH float

Histone_ChIP-seq_ENCSR149XIH
Histone_ChIP-seq ENCSR149XIH [biosample_summary="Homo sapiens duodenal mucosa tissue male adult (76 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR149XIH [1.85, 77.5]
n
51,873,387
mean
20.4
sd
13.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 518733871.61% 48213
chr1 5134727 2.06% 4702
chr2 3532033 1.46% 3329
chr3 2903535 1.46% 2569
chr4 2175446 1.14% 2001
chr5 2483486 1.37% 2195
chr6 3032081 1.78% 2653
chr7 2488300 1.56% 2353
chr8 1943014 1.34% 1841
chr9 2130593 1.54% 1984
chr10 2246237 1.68% 2103
chr11 2773871 2.05% 2483
chr12 2694667 2.02% 2389
chr13 1110560 0.97% 1067
chr14 1700078 1.59% 1498
chr15 1673797 1.64% 1492
chr16 2059530 2.28% 2015
chr17 2963427 3.56% 2731
chr18 889683 1.11% 892
chr19 3597326 6.14% 3753
chr20 1320171 2.05% 1244
chr21 560187 1.20% 569
chr22 1125577 2.21% 1072
chrX 1269146 0.81% 1216
chrY 65915 0.12% 62
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 48213 170 10198 1075.92 709
global segment-length histogram

Files

Filename Size md5
ENCFF106YGP.bed.gz 1.1 MB bf7ecec35249f72731f0a93d4cb2fd1a
ENCFF106YGP.tabix.bed.gz 513.7 KB 1855225fda111b4fbe26dde387f4ddd6
ENCFF106YGP.tabix.bed.gz.tbi 213.52 KB f06b815501f47c0e9fd1161785c7fb53
genomic_resource.yaml 1.51 KB 5abc8c0de12d45fb8c6dae4b4e5bf51c
statistics/