Resource
| Id | Histone_ChIP-seq/ENCSR144SOW |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Histone_ChIP-seq ENCSR144SOW [biosample_summary="Homo sapiens BLaER1 18 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H4K20me1"] |
| Description |
status: released biological_replicates: Rep 1 summary: 18 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1 output_type: peaks audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-joint-replicate-peak-calling-step-v-1|/analysis-steps/crg-chip-seq-joint-replicate-peak-calling-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-alignment-and-filtering-step-v-1|/analysis-steps/crg-chip-seq-alignment-and-filtering-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-bed-to-bigbed-conversion-step-v-1|/analysis-steps/crg-chip-seq-bed-to-bigbed-conversion-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} audit_internal_action: Released analysis step version {crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0|/analysis-step-versions/crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR144SOW | float |
Histone_ChIP-seq_ENCSR144SOW |
Histone_ChIP-seq ENCSR144SOW [biosample_summary="Homo sapiens BLaER1 18 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H4K20me1"]
|
 |
[1.18, 29.2] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 147369975 | 4.58% | 124243 |
| chr1 | 14092255 | 5.66% | 11770 |
| chr1_KI270706v1_random | 258 | 0.15% | 1 |
| chr1_KI270712v1_random | 1246 | 0.71% | 3 |
| chr1_KI270713v1_random | 780 | 1.91% | 2 |
| chr2 | 11000194 | 4.54% | 9073 |
| chr3 | 8293327 | 4.18% | 7338 |
| chr4 | 5390090 | 2.83% | 4980 |
| chr5 | 7279000 | 4.01% | 6158 |
| chr6 | 6260141 | 3.67% | 5597 |
| chr7 | 8242910 | 5.17% | 7269 |
| chr8 | 7241870 | 4.99% | 5374 |
| chr9 | 6377203 | 4.61% | 5417 |
| chr10 | 7515055 | 5.62% | 6488 |
| chr11 | 6711267 | 4.97% | 5693 |
| chr12 | 7063766 | 5.30% | 5855 |
| chr13 | 2983564 | 2.61% | 2586 |
| chr14 | 4414847 | 4.12% | 3915 |
| chr14_GL000194v1_random | 2237 | 1.17% | 6 |
| chr15 | 4737270 | 4.64% | 4122 |
| chr16 | 7245198 | 8.02% | 5652 |
| chr17 | 8773722 | 10.54% | 7315 |
| chr18 | 2537852 | 3.16% | 2479 |
| chr19 | 6994959 | 11.93% | 5079 |
| chr20 | 4368053 | 6.78% | 3472 |
| chr21 | 1916697 | 4.10% | 1470 |
| chr22 | 4656809 | 9.16% | 3497 |
| chr22_KI270733v1_random | 268 | 0.15% | 1 |
| chrUn_GL000195v1 | 647 | 0.35% | 1 |
| chrUn_GL000219v1 | 5075 | 2.83% | 7 |
| chrUn_KI270438v1 | 3530 | 3.14% | 4 |
| chrUn_KI270750v1 | 250 | 0.17% | 1 |
| chrX | 3259144 | 2.09% | 3617 |
| chrY | 491 | <0.01% | 1 |
| 3333 contigs with no values (127690552 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 124243 | 250 | 162793 | 1186.14 | 482 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF594LTD.bed.gz | 2.39 MB | b30323e397e363e6ca93c3bc891c9c24 |
| ENCFF594LTD.tabix.bed.gz | 1.18 MB | 817b2838f1e80c3fe17aa2cc483a32fd |
| ENCFF594LTD.tabix.bed.gz.tbi | 163.47 KB | 901d69e5bc4fd562e82493b5dc582e39 |
| genomic_resource.yaml | 3.12 KB | 51fe624e0596aeb92db12fcc15378c3b |
| statistics/ |