Resource

Id Histone_ChIP-seq/ENCSR144RXLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR144RXL [biosample_summary="Homo sapiens mesendoderm originated from H1" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR144RXL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/in_vitro_differentiated_cells_NTR_0000856/
  • biosample_summary: Homo sapiens mesendoderm originated from H1
  • date_created: 2015-09-16T19:16:56.185325+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR144RXL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male embryo
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR144RXL float

Histone_ChIP-seq_ENCSR144RXL
Histone_ChIP-seq ENCSR144RXL [biosample_summary="Homo sapiens mesendoderm originated from H1" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR144RXL [1.98, 9.32]
n
11,491,102
mean
3.8
sd
0.819

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 114911020.36% 46215
chr1 1287952 0.52% 5099
chr2 663861 0.27% 2863
chr3 628203 0.32% 2592
chr4 317317 0.17% 1416
chr4_GL000008v2_random 343 0.16% 2
chr5 545785 0.30% 2258
chr6 456809 0.27% 1862
chr7 488801 0.31% 2042
chr8 315871 0.22% 1359
chr9 530248 0.38% 2108
chr10 429594 0.32% 1801
chr11 648193 0.48% 2547
chr12 727707 0.55% 2814
chr13 146816 0.13% 679
chr14 344596 0.32% 1445
chr14_GL000225v1_random 293 0.14% 2
chr15 386868 0.38% 1561
chr16 630180 0.70% 2442
chr17 797582 0.96% 3074
chr18 144859 0.18% 643
chr19 918742 1.57% 3372
chr20 441346 0.68% 1749
chr21 159425 0.34% 656
chr22 411602 0.81% 1536
chr22_KI270736v1_random 905 0.50% 4
chrUn_GL000216v2 525 0.30% 3
chrUn_KI270442v1 297 0.08% 2
chrUn_KI270591v1 196 3.38% 1
chrUn_KI270744v1 167 0.10% 1
chrUn_KI270757v1 142 0.20% 1
chrX 62539 0.04% 263
chrY 3338 0.01% 18
3334 contigs with no values (127660095 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 46215 115 2994 248.64 202
global segment-length histogram

Files

Filename Size md5
ENCFF771IYF.bed.gz 804.17 KB 91be3fd379eac1fd44b2053d181a8672
ENCFF771IYF.tabix.bed.gz 438.5 KB 64a496f066009fcf85f5e56d62e746d2
ENCFF771IYF.tabix.bed.gz.tbi 117.49 KB bd2f6c7b8a302b88f85a83fca7d2510f
genomic_resource.yaml 1.95 KB 2c4ff3429dd02bcb39509d6f061fba03
statistics/