Resource

Id Histone_ChIP-seq/ENCSR141EDVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR141EDV [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (87 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR141EDV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue male adult (87 years)
  • date_created: 2021-01-28T04:10:42.169073+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR141EDV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (87 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR141EDV float

Histone_ChIP-seq_ENCSR141EDV
Histone_ChIP-seq ENCSR141EDV [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (87 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR141EDV [1.95, 54]
n
51,292,912
mean
21.7
sd
12

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 512929121.59% 30071
chr1 4980682 2.00% 2908
chr2 3637534 1.50% 2162
chr3 3054139 1.54% 1757
chr4 2166558 1.14% 1262
chr5 2585970 1.42% 1509
chr6 2994429 1.75% 1739
chr7 2502365 1.57% 1530
chr8 2026369 1.40% 1173
chr9 2179082 1.57% 1320
chr10 2257638 1.69% 1339
chr11 2728299 2.02% 1541
chr12 2605038 1.95% 1478
chr13 1227483 1.07% 735
chr14 1680229 1.57% 965
chr15 1592380 1.56% 948
chr16 1931343 2.14% 1165
chr17 2781712 3.34% 1581
chr18 1033362 1.29% 622
chr19 2971947 5.07% 1739
chr20 1293879 2.01% 760
chr21 523329 1.12% 334
chr22 1079534 2.12% 625
chrX 1412897 0.91% 853
chrY 46714 0.08% 26
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 30071 240 34530 1705.73 1376
global segment-length histogram

Files

Filename Size md5
ENCFF491IPL.bed.gz 771.88 KB 53844b5dc7e898dd44ae4ee353b02ded
ENCFF491IPL.tabix.bed.gz 342.71 KB 82f22cd874a85fab11415fd7421cc05a
ENCFF491IPL.tabix.bed.gz.tbi 187.29 KB 8bf4804a0525fc7923285f49175f9faa
genomic_resource.yaml 1.56 KB bb6418ccc7b4489538f7c39290893fa9
statistics/