Resource

Id Histone_ChIP-seq/ENCSR138TQFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR138TQF [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR138TQF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-04-30T04:17:58.879127+00:00
  • date_released: 2022-01-06
  • doi: 10.17989/ENCSR138TQF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (90 or above years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR138TQF float

Histone_ChIP-seq_ENCSR138TQF
Histone_ChIP-seq ENCSR138TQF [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR138TQF [1.91, 32.1]
n
60,098,251
mean
6.63
sd
3.23

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 600982511.87% 65271
chr1 6128072 2.46% 6488
chr2 4569071 1.89% 4974
chr3 3770907 1.90% 4193
chr4 2548354 1.34% 2776
chr5 3404088 1.88% 3666
chr6 3274209 1.92% 3527
chr7 2839624 1.78% 3234
chr8 2459183 1.69% 2712
chr9 2857626 2.06% 3086
chr10 3232149 2.42% 3315
chr11 3618628 2.68% 3844
chr12 3178904 2.39% 3586
chr13 1465369 1.28% 1624
chr14 2055296 1.92% 2081
chr15 2057884 2.02% 2214
chr16 1867550 2.07% 2167
chr17 3112274 3.74% 3293
chr18 1233285 1.53% 1360
chr19 2162242 3.69% 2411
chr20 1685046 2.61% 1790
chr21 669462 1.43% 728
chr22 1291877 2.54% 1371
chrX 617151 0.40% 831
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 65271 175 25892 920.75 636
global segment-length histogram

Files

Filename Size md5
ENCFF955SXY.bed.gz 1.31 MB 78613a6e985110b9f1f22869a21ec162
ENCFF955SXY.tabix.bed.gz 660.51 KB 716e3f13d95ef9b6218e7eb5d271c624
ENCFF955SXY.tabix.bed.gz.tbi 219.87 KB bb2584adc8d07bdf5d74bb4b3abcedb4
genomic_resource.yaml 1.61 KB a78be13c7900752c80bb3d8e8637486d
statistics/