Resource

Id Histone_ChIP-seq/ENCSR136ZQZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR136ZQZ [biosample_summary="Homo sapiens testis tissue male adult (37 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR136ZQZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000473/
  • biosample_summary: Homo sapiens testis tissue male adult (37 years)
  • date_created: 2017-12-06T21:12:40.119225+00:00
  • date_released: 2019-02-12
  • doi: 10.17989/ENCSR136ZQZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR136ZQZ float

Histone_ChIP-seq_ENCSR136ZQZ
Histone_ChIP-seq ENCSR136ZQZ [biosample_summary="Homo sapiens testis tissue male adult (37 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR136ZQZ [1.69, 30.5]
n
50,763,030
mean
6.65
sd
3.92

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 507630301.58% 43062
chr1 5014970 2.01% 4109
chr2 3810880 1.57% 3234
chr3 3159303 1.59% 2681
chr4 1854644 0.98% 1637
chr5 2304049 1.27% 1887
chr6 2991574 1.75% 2521
chr7 2344812 1.47% 2031
chr8 2152277 1.48% 1811
chr9 2338619 1.69% 2005
chr10 2443545 1.83% 2098
chr11 2673774 1.98% 2161
chr12 2677326 2.01% 2193
chr13 1009510 0.88% 908
chr14 1934280 1.81% 1603
chr15 1751135 1.72% 1471
chr16 1791480 1.98% 1664
chr17 2775896 3.33% 2320
chr18 1044295 1.30% 960
chr19 2557330 4.36% 2110
chr20 1463830 2.27% 1277
chr21 574254 1.23% 512
chr22 1148617 2.26% 976
chrX 919760 0.59% 875
chrY 26870 0.05% 18
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 43062 215 19715 1178.84 893
global segment-length histogram

Files

Filename Size md5
ENCFF540YUQ.bed.gz 1004.06 KB 19f4e4d4c021ef9955a4fbe287ee69ec
ENCFF540YUQ.tabix.bed.gz 464.46 KB b375f8e0bf171789a620c1d2c9a00f30
ENCFF540YUQ.tabix.bed.gz.tbi 185.35 KB 6b5b7a048cb5a0ad325260cf0beb5906
genomic_resource.yaml 1.7 KB 4b69507fb3f6fc10bd4028d4a46871e8
statistics/