Resource

Id Histone_ChIP-seq/ENCSR136NZRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR136NZR [biosample_summary="Homo sapiens BLaER1 18 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR136NZR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 18 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:12.152698+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR136NZR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 18 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR136NZR float

Histone_ChIP-seq_ENCSR136NZR
Histone_ChIP-seq ENCSR136NZR [biosample_summary="Homo sapiens BLaER1 18 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR136NZR [1.62, 24.1]
n
257,821,632
mean
7.36
sd
3.42

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2578216328.01% 130799
chr1 24207654 9.72% 12214
chr2 19882042 8.21% 10207
chr3 14281662 7.20% 7830
chr4 9633439 5.06% 5389
chr5 12660892 6.97% 6572
chr6 12896951 7.55% 7010
chr7 12567984 7.89% 6707
chr8 11881516 8.19% 6209
chr9 11376959 8.22% 5517
chr10 13440972 10.05% 6736
chr11 12695145 9.40% 6384
chr12 12016845 9.02% 6178
chr13 5818310 5.09% 3273
chr14 8431930 7.88% 4144
chr15 8390408 8.23% 4260
chr16 11327299 12.54% 5123
chr17 14573220 17.50% 6632
chr18 5244251 6.52% 2786
chr19 11117325 18.97% 5275
chr20 9260030 14.37% 4394
chr21 3495563 7.48% 1651
chr22 7737094 15.22% 3284
chrX 4884141 3.13% 3024
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 130799 294 53046 1971.13 1336
global segment-length histogram

Files

Filename Size md5
ENCFF471JTZ.bed.gz 3.46 MB b93e76218a4731f5b42a7e87840e691d
ENCFF471JTZ.tabix.bed.gz 1.43 MB 178de759480522f09c0e53d7fe34a8e0
ENCFF471JTZ.tabix.bed.gz.tbi 338.03 KB 95107053e31c36f14eccd4dbb09b7abc
genomic_resource.yaml 2.32 KB acbac1898db91952f02212f96b8eb1f9
statistics/