Resource

Id Histone_ChIP-seq/ENCSR136KIMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR136KIM [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue male adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR136KIM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue male adult (90 or above years)
  • date_created: 2021-04-30T04:18:16.712713+00:00
  • date_released: 2022-01-06
  • doi: 10.17989/ENCSR136KIM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (90 or above years) with mild cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR136KIM float

Histone_ChIP-seq_ENCSR136KIM
Histone_ChIP-seq ENCSR136KIM [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue male adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR136KIM [1.82, 38.8]
n
59,627,014
mean
7.58
sd
4.45

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 596270141.85% 45441
chr1 6145602 2.47% 4596
chr2 4222807 1.74% 3312
chr3 3529463 1.78% 2751
chr4 2251904 1.18% 1788
chr5 3081143 1.70% 2385
chr6 3103688 1.82% 2329
chr7 2513190 1.58% 2073
chr8 2374251 1.64% 1907
chr9 2902119 2.10% 2139
chr10 3193825 2.39% 2297
chr11 3708784 2.75% 2748
chr12 3039962 2.28% 2380
chr13 1338860 1.17% 1031
chr14 2046698 1.91% 1483
chr15 2023958 1.98% 1580
chr16 2112892 2.34% 1605
chr17 3561056 4.28% 2562
chr18 1146274 1.43% 904
chr19 2730910 4.66% 2041
chr20 1730074 2.68% 1306
chr21 608766 1.30% 475
chr22 1513194 2.98% 1089
chrX 731328 0.47% 648
chrY 16266 0.03% 12
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 45441 235 27942 1312.19 951
global segment-length histogram

Files

Filename Size md5
ENCFF318GXB.bed.gz 982.45 KB e8a6a7690d37b1ac1be4d3546bdd995d
ENCFF318GXB.tabix.bed.gz 473.95 KB dda449958a8a8aee73ea5ac324fb1f73
ENCFF318GXB.tabix.bed.gz.tbi 188.14 KB 02c15a16fbb3a5da142cc56045849fb7
genomic_resource.yaml 1.76 KB d9de1b13cf4c52f371a3f85303d695a7
statistics/