Resource

Id Histone_ChIP-seq/ENCSR134LLKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR134LLK [biosample_summary="Homo sapiens breast epithelium tissue female adult (51 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR134LLK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008367/
  • biosample_summary: Homo sapiens breast epithelium tissue female adult (51 years)
  • date_created: 2019-04-27T23:36:58.106650+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR134LLK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR134LLK float

Histone_ChIP-seq_ENCSR134LLK
Histone_ChIP-seq ENCSR134LLK [biosample_summary="Homo sapiens breast epithelium tissue female adult (51 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR134LLK [1.45, 10.1]
n
55,843,575
mean
3.77
sd
1.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 558435751.74% 60736
chr1 3066612 1.23% 3060
chr2 1928670 0.80% 1883
chr3 966592 0.49% 917
chr4 1356277 0.71% 1122
chr5 1488116 0.82% 1387
chr6 1569459 0.92% 1449
chr7 1826394 1.15% 1619
chr8 1746096 1.20% 1688
chr9 1529263 1.11% 1402
chr10 2105459 1.57% 2000
chr11 1508475 1.12% 1606
chr12 1635193 1.23% 1666
chr13 883543 0.77% 801
chr14 1149321 1.07% 1161
chr15 914025 0.90% 975
chr16 1624643 1.80% 1544
chr17 2163964 2.60% 1951
chr18 556989 0.69% 617
chr19 2161408 3.69% 2153
chr20 1988984 3.09% 1850
chr21 409786 0.88% 447
chr22 1452565 2.86% 1558
chrX 21811741 13.98% 27880
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 60736 215 45235 919.45 634
global segment-length histogram

Files

Filename Size md5
ENCFF520QGK.bed.gz 1.12 MB cbb8c784099663795c243b30877cc06d
ENCFF520QGK.tabix.bed.gz 593.44 KB 2a32ad5b4191ba03045af1ad7adb2eff
ENCFF520QGK.tabix.bed.gz.tbi 131.19 KB 169c49bde080bd9220f3ff0370e91d25
genomic_resource.yaml 1.74 KB ed18e88fd3a5f4609fbe2e885898d447
statistics/