Resource

Id Histone_ChIP-seq/ENCSR133QBGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR133QBG [biosample_summary="Homo sapiens prostate gland tissue male adult (54 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR133QBG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002367/
  • biosample_summary: Homo sapiens prostate gland tissue male adult (54 years)
  • date_created: 2017-07-28T10:09:21.947855+00:00
  • date_released: 2017-08-28
  • doi: 10.17989/ENCSR133QBG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR133QBG float

Histone_ChIP-seq_ENCSR133QBG

Histone_ChIP-seq ENCSR133QBG [biosample_summary="Homo sapiens prostate gland tissue male adult (54 years)" and target="H3K9me3"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR133QBG [1.24, 4.91]
n
79,736
mean
3.42
sd
0.632

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 79736<0.01% 337
chr1 4993 <0.01% 19
chr2 4468 <0.01% 19
chr3 7384 <0.01% 33
chr4 5669 <0.01% 24
chr5 5585 <0.01% 26
chr6 6043 <0.01% 25
chr7 6706 <0.01% 28
chr8 4171 <0.01% 17
chr9 2918 <0.01% 12
chr10 3798 <0.01% 15
chr11 2598 <0.01% 11
chr12 3005 <0.01% 13
chr13 3576 <0.01% 16
chr14 1818 <0.01% 8
chr15 2169 <0.01% 11
chr16 2229 <0.01% 10
chr17 1371 <0.01% 6
chr18 1434 <0.01% 7
chr19 5504 0.01% 18
chr20 1407 <0.01% 7
chr21 2140 <0.01% 9
chr22 169 <0.01% 1
chrY 581 <0.01% 2
3343 contigs with no values (285117980 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 337 120 700 236.61 218
global segment-length histogram

Files

Filename Size md5
ENCFF414ESK.bed.gz 7.13 KB 58f4d6bdd7b7754534b58e148d1e31bf
ENCFF414ESK.tabix.bed.gz 3.71 KB 0e4d441eae81a298e33e5e2b74aafde3
ENCFF414ESK.tabix.bed.gz.tbi 7.88 KB f649e4bca6c4f358bd822218d31c177b
genomic_resource.yaml 1.98 KB bac8d5d3b28c4ae4d9a1a72df8d7db3d
statistics/