Resource

Id Histone_ChIP-seq/ENCSR130EMLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR130EML [biosample_summary="Homo sapiens H1" and target="H3K4ac"]
Description
Labels
  • accession: ENCSR130EML
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003042/
  • biosample_summary: Homo sapiens H1
  • date_created: 2015-10-01T07:16:02.967027+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR130EML
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K4ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR130EML float

Histone_ChIP-seq_ENCSR130EML
Histone_ChIP-seq ENCSR130EML [biosample_summary="Homo sapiens H1" and target="H3K4ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR130EML [1.53, 21.7]
n
10,452,384
mean
3.96
sd
1.11

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 104523840.32% 44451
chr1 1087186 0.44% 4566
chr2 738878 0.31% 3160
chr3 567060 0.29% 2479
chr4 382722 0.20% 1697
chr5 515416 0.28% 2192
chr6 551728 0.32% 2388
chr7 539188 0.34% 2276
chr8 432595 0.30% 1853
chr9 462204 0.33% 1939
chr10 510100 0.38% 2191
chr11 582650 0.43% 2471
chr12 490196 0.37% 2090
chr13 234960 0.21% 1033
chr14 316200 0.30% 1362
chr15 314426 0.31% 1352
chr16 434039 0.48% 1817
chr17 605356 0.73% 2490
chr18 205687 0.26% 902
chr19 534075 0.91% 2218
chr20 344915 0.54% 1452
chr21 150408 0.32% 619
chr22 323591 0.64% 1341
chrX 122906 0.08% 537
chrY 5898 0.01% 26
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 44451 120 2055 235.14 199
global segment-length histogram

Files

Filename Size md5
ENCFF327EZJ.bed.gz 895.92 KB 42f471ca65e870603dd4776d2775dab4
ENCFF327EZJ.tabix.bed.gz 439.92 KB 48138805a959cc3424407f5a7e1144a9
ENCFF327EZJ.tabix.bed.gz.tbi 210.59 KB 434d478bf844c61d76339b2419558979
genomic_resource.yaml 1.84 KB da97ebf743015303f92f4183a2908377
statistics/