Resource

Id Histone_ChIP-seq/ENCSR128YOHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR128YOH [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (79 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR128YOH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (79 years)
  • date_created: 2021-04-30T04:18:01.437429+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR128YOH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (79 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR128YOH float

Histone_ChIP-seq_ENCSR128YOH
Histone_ChIP-seq ENCSR128YOH [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (79 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR128YOH [1.85, 54.1]
n
53,157,694
mean
22.7
sd
12.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 531576941.65% 31340
chr1 5174988 2.08% 3022
chr2 3723204 1.54% 2211
chr3 3180082 1.60% 1764
chr4 2230577 1.17% 1271
chr5 2736991 1.51% 1545
chr6 3103099 1.82% 1813
chr7 2578366 1.62% 1584
chr8 2102276 1.45% 1218
chr9 2166438 1.57% 1329
chr10 2285016 1.71% 1349
chr11 2861026 2.12% 1605
chr12 2833975 2.13% 1569
chr13 1223335 1.07% 752
chr14 1694932 1.58% 961
chr15 1651533 1.62% 996
chr16 2012788 2.23% 1242
chr17 2869246 3.45% 1732
chr18 1006312 1.25% 610
chr19 3166405 5.40% 1979
chr20 1340773 2.08% 813
chr21 512847 1.10% 333
chr22 1177891 2.32% 712
chrX 1525284 0.98% 929
chrY 310 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 31340 200 24517 1696.16 1280
global segment-length histogram

Files

Filename Size md5
ENCFF525EJT.bed.gz 755.43 KB f21f81150d04e17ed5e64c37af2b9499
ENCFF525EJT.tabix.bed.gz 345.73 KB 6b8a7e09426bdb3782f8d3919df7f8b0
ENCFF525EJT.tabix.bed.gz.tbi 181.14 KB e2ec99ed841a466d4c954088973fa0d9
genomic_resource.yaml 1.57 KB 0fff56dffb07d1e2dfb9f6228b52f831
statistics/