Resource

Id Histone_ChIP-seq/ENCSR127MFAcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR127MFA [biosample_summary="Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR127MFA
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_NTR_0000427/
  • biosample_summary: Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence
  • date_created: 2015-09-15T20:27:16.795056+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR127MFA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (17 weeks)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR127MFA float

Histone_ChIP-seq_ENCSR127MFA
Histone_ChIP-seq ENCSR127MFA [biosample_summary="Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR127MFA [1.88, 11.1]
n
76,448,317
mean
4.46
sd
1.17

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 764483172.38% 134944
chr1 7664436 3.08% 13376
chr2 5630802 2.32% 10746
chr3 4385991 2.21% 8063
chr4 2895418 1.52% 5592
chr5 3674604 2.02% 6886
chr6 3034872 1.78% 5680
chr7 3632080 2.28% 6564
chr8 2410100 1.66% 4570
chr9 3386978 2.45% 5683
chr10 3117548 2.33% 5829
chr11 4055306 3.00% 6937
chr12 4235172 3.18% 7315
chr13 1450646 1.27% 2898
chr14 2659435 2.48% 4907
chr15 2820157 2.77% 5116
chr16 3693680 4.09% 5997
chr17 4681588 5.62% 7748
chr18 1208481 1.50% 2409
chr19 5788834 9.88% 8340
chr20 2473823 3.84% 4162
chr21 814550 1.74% 1415
chr22 2200132 4.33% 3465
chrX 533684 0.34% 1246
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 134944 185 11579 566.52 406
global segment-length histogram

Files

Filename Size md5
ENCFF807URE.bed.gz 2.26 MB 6235ac3b28d79855626e95d390212478
ENCFF807URE.tabix.bed.gz 1.22 MB ea3b0205873eb691b1eeab8d6f5cee5e
ENCFF807URE.tabix.bed.gz.tbi 182.92 KB 9ebc95bee5f31d2beea49880247ad52e
genomic_resource.yaml 2.1 KB 5b8a60662182c2cb1a11504dcca954ab
statistics/