Resource

Id Histone_ChIP-seq/ENCSR126FJYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR126FJY [biosample_summary="Homo sapiens layer of hippocampus tissue male adult (81 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR126FJY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002305/
  • biosample_summary: Homo sapiens layer of hippocampus tissue male adult (81 years)
  • date_created: 2015-09-15T19:49:16.843074+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR126FJY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (81 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR126FJY float

Histone_ChIP-seq_ENCSR126FJY
Histone_ChIP-seq ENCSR126FJY [biosample_summary="Homo sapiens layer of hippocampus tissue male adult (81 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR126FJY [2, 14.9]
n
25,370,633
mean
5.65
sd
1.58

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 253706330.79% 31431
chr1 2609975 1.05% 3236
chr2 1537685 0.63% 1998
chr3 1455549 0.73% 1826
chr4 611015 0.32% 866
chr5 918376 0.51% 1217
chr6 993328 0.58% 1277
chr7 1006153 0.63% 1294
chr8 645811 0.44% 871
chr9 1249643 0.90% 1531
chr10 914071 0.68% 1204
chr11 1520822 1.13% 1851
chr12 1522970 1.14% 1854
chr13 292505 0.26% 433
chr14 805875 0.75% 1034
chr15 890397 0.87% 1128
chr16 1490371 1.65% 1794
chr17 1842800 2.21% 2165
chr18 279064 0.35% 391
chr19 2338781 3.99% 2534
chr20 980100 1.52% 1177
chr21 293995 0.63% 366
chr22 1004087 1.98% 1134
chrX 162811 0.10% 243
chrY 4449 0.01% 7
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 31431 245 8646 807.19 671
global segment-length histogram

Files

Filename Size md5
ENCFF518APA.bed.gz 567.26 KB 24d95ae4348538ea246c3b7131865bc2
ENCFF518APA.tabix.bed.gz 303.17 KB c58026d3f429e24fed1b42b1aa19d1ff
ENCFF518APA.tabix.bed.gz.tbi 109.33 KB 02d79caa015db4dfa8d77b713dfe2c7e
genomic_resource.yaml 2.03 KB f3c3986c33ebc1b64d7009e4d29ae8f1
statistics/