Resource

Id Histone_ChIP-seq/ENCSR122LOZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR122LOZ [biosample_summary="Homo sapiens ascending aorta tissue female adult (53 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR122LOZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001496/
  • biosample_summary: Homo sapiens ascending aorta tissue female adult (53 years)
  • date_created: 2016-10-19T23:12:36.096248+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR122LOZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR122LOZ float

Histone_ChIP-seq_ENCSR122LOZ
Histone_ChIP-seq ENCSR122LOZ [biosample_summary="Homo sapiens ascending aorta tissue female adult (53 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR122LOZ [1.33, 33.2]
n
44,195,899
mean
13.8
sd
6.39

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 441958991.37% 29670
chr1 4351108 1.75% 2835
chr2 3112400 1.29% 2070
chr3 2584311 1.30% 1734
chr4 1896499 1.00% 1254
chr5 2184034 1.20% 1452
chr6 2598772 1.52% 1714
chr7 2161258 1.36% 1476
chr8 1638104 1.13% 1100
chr9 1842774 1.33% 1259
chr10 1961760 1.47% 1341
chr11 2387292 1.77% 1490
chr12 2411117 1.81% 1580
chr13 952966 0.83% 647
chr14 1395639 1.30% 907
chr15 1449436 1.42% 953
chr16 1654595 1.83% 1132
chr17 2383858 2.86% 1558
chr18 799506 0.99% 564
chr19 2673971 4.56% 1982
chr20 1111036 1.72% 762
chr21 451961 0.97% 321
chr22 932990 1.84% 623
chrM 7030 42.43% 9
chrX 1252919 0.80% 906
chrY 563 <0.01% 1
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 29670 210 15846 1489.58 1170
global segment-length histogram

Files

Filename Size md5
ENCFF663VFR.bed.gz 755.35 KB 6eda692c4e82f5576b828f40d72f1ee8
ENCFF663VFR.tabix.bed.gz 336.0 KB 953d95cfc9f64cb42ae15d231eace618
ENCFF663VFR.tabix.bed.gz.tbi 174.71 KB 03e58e240bc21102c93b3772d5da3f39
genomic_resource.yaml 1.52 KB 1dcf1f8dce77b86173d2cd8d3be01d31
statistics/