Resource

Id Histone_ChIP-seq/ENCSR121RSScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR121RSS [biosample_summary="Homo sapiens esophagus squamous epithelium tissue female adult (53 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR121RSS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006920/
  • biosample_summary: Homo sapiens esophagus squamous epithelium tissue female adult (53 years)
  • date_created: 2017-01-24T04:33:21.758253+00:00
  • date_released: 2017-01-27
  • doi: 10.17989/ENCSR121RSS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR121RSS float

Histone_ChIP-seq_ENCSR121RSS
Histone_ChIP-seq ENCSR121RSS [biosample_summary="Homo sapiens esophagus squamous epithelium tissue female adult (53 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR121RSS [1.56, 9.3]
n
96,494,553
mean
3.43
sd
1.04

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 964945533.00% 99232
chr1 10502191 4.22% 10268
chr2 7486042 3.09% 8031
chr3 6031534 3.04% 6512
chr4 3268264 1.72% 3797
chr5 4646997 2.56% 5012
chr6 5084888 2.98% 5778
chr7 4040631 2.54% 4481
chr8 3819940 2.63% 4207
chr9 4515584 3.26% 4453
chr10 5057493 3.78% 5044
chr11 5400419 4.00% 5398
chr12 4769557 3.58% 4934
chr13 1797134 1.57% 2085
chr14 3499312 3.27% 3410
chr15 3513769 3.45% 3577
chr16 3920846 4.34% 3765
chr17 5850247 7.03% 5290
chr17_GL000205v2_random 1585 0.85% 2
chr18 1581079 1.97% 1846
chr19 4095313 6.99% 3752
chr20 3070774 4.77% 2984
chr21 1152473 2.47% 1248
chr22 2726065 5.36% 2445
chrUn_GL000195v1 451 0.25% 1
chrUn_GL000219v1 1200 0.67% 3
chrX 660765 0.42% 909
3340 contigs with no values (185756815 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 99232 280 20575 972.41 717
global segment-length histogram

Files

Filename Size md5
ENCFF672JUL.bed.gz 2.12 MB 16f59884753a97bbd553c639b6223a4f
ENCFF672JUL.tabix.bed.gz 1.02 MB 1709fe4246f3f11a1cdf28e489f76d63
ENCFF672JUL.tabix.bed.gz.tbi 281.83 KB 244080565b1c29f6ec52f8b8b08e5784
genomic_resource.yaml 1.57 KB 25e7723d986a3aaa4e6e5b803fdd92d3
statistics/