Resource

Id Histone_ChIP-seq/ENCSR116MKXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR116MKX [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (88 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR116MKX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (88 years)
  • date_created: 2021-04-30T04:18:10.760719+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR116MKX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (88 years) with mild cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR116MKX float

Histone_ChIP-seq_ENCSR116MKX
Histone_ChIP-seq ENCSR116MKX [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (88 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR116MKX [1.91, 50.7]
n
128,213,976
mean
9.64
sd
6.17

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1282139763.99% 77491
chr1 12875716 5.17% 7509
chr2 8605380 3.55% 5544
chr3 7643782 3.85% 4748
chr4 4837537 2.54% 3167
chr5 6810778 3.75% 4301
chr6 6298354 3.69% 3950
chr7 6041096 3.79% 3966
chr8 5227973 3.60% 3285
chr9 6345426 4.59% 3757
chr10 6116406 4.57% 3574
chr11 7974421 5.90% 4510
chr12 6590887 4.95% 4032
chr13 2876331 2.52% 1828
chr14 4539585 4.24% 2654
chr15 4235232 4.15% 2515
chr16 4920258 5.45% 2912
chr17 7608837 9.14% 4225
chr18 2686703 3.34% 1696
chr19 5503326 9.39% 3086
chr20 3967671 6.16% 2258
chr21 1293054 2.77% 805
chr22 3391848 6.67% 1838
chrX 1823375 1.17% 1331
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 77491 215 99261 1654.57 1071
global segment-length histogram

Files

Filename Size md5
ENCFF745ROB.bed.gz 1.74 MB 009e1a6c3dcfcd1f5205017ae9f91708
ENCFF745ROB.tabix.bed.gz 822.43 KB a1caa6beb2571e412028a30319399c3a
ENCFF745ROB.tabix.bed.gz.tbi 238.41 KB ee82e6a082343d422e68269cf7361718
genomic_resource.yaml 1.72 KB 479c053c6ef452ad0fd69a6372ea8593
statistics/