Resource

Id Histone_ChIP-seq/ENCSR105URNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR105URN [biosample_summary="Homo sapiens spleen tissue female adult (53 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR105URN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue female adult (53 years)
  • date_created: 2016-10-19T23:14:56.375247+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR105URN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR105URN float

Histone_ChIP-seq_ENCSR105URN
Histone_ChIP-seq ENCSR105URN [biosample_summary="Homo sapiens spleen tissue female adult (53 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR105URN [1.47, 19.9]
n
143,216,052
mean
4.56
sd
2.48

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1432160524.45% 122661
chr1 8936405 3.59% 7379
chr2 11099213 4.58% 9984
chr3 9111544 4.59% 8394
chr4 9971642 5.24% 9538
chr5 9734734 5.36% 8778
chr6 7967036 4.66% 7373
chr7 9154057 5.74% 7763
chr8 7429974 5.12% 6480
chr9 5098095 3.68% 4446
chr10 5838736 4.36% 4991
chr11 6690732 4.95% 6010
chr12 6666456 5.00% 5214
chr13 4656964 4.07% 4764
chr14 4602737 4.30% 4180
chr15 3540708 3.47% 2914
chr16 4069313 4.50% 3475
chr17 2442354 2.93% 2043
chr18 3275615 4.08% 3064
chr19 9474260 16.16% 3444
chr20 2524941 3.92% 2324
chr21 2058729 4.41% 1962
chr22 1441239 2.84% 1149
chrX 7429189 4.76% 6988
chrY 1379 <0.01% 4
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 122661 213 137979 1167.58 733
global segment-length histogram

Files

Filename Size md5
ENCFF715RKR.bed.gz 2.66 MB bb0576649367e75be99e7eecda578967
ENCFF715RKR.tabix.bed.gz 1.25 MB 2a911ed8e2f0a4c38e6c7240b315165e
ENCFF715RKR.tabix.bed.gz.tbi 408.54 KB e4545252511a11a5ed48da2d6b6a273f
genomic_resource.yaml 1.71 KB 0bc6b377605320f2713251b3e89db088
statistics/