Resource

Id Histone_ChIP-seq/ENCSR105EMQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR105EMQ [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (39 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR105EMQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_2000001/
  • biosample_summary: Homo sapiens peripheral blood mononuclear cell male adult (39 years)
  • date_created: 2017-03-22T16:16:53.244824+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR105EMQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (39 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR105EMQ float

Histone_ChIP-seq_ENCSR105EMQ
Histone_ChIP-seq ENCSR105EMQ [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (39 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR105EMQ [1.29, 11.3]
n
2,002,291
mean
5
sd
1.27

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 20022910.06% 3897
chr1 213221 0.09% 416
chr2 176426 0.07% 322
chr3 109029 0.05% 228
chr4 61069 0.03% 121
chr5 101829 0.06% 201
chr6 100135 0.06% 212
chr7 93842 0.06% 181
chr8 74064 0.05% 146
chr9 76413 0.06% 147
chr10 79791 0.06% 160
chr11 115488 0.09% 217
chr12 109142 0.08% 211
chr13 41915 0.04% 81
chr14 84723 0.08% 159
chr15 65973 0.06% 127
chr16 74517 0.08% 155
chr17 132201 0.16% 245
chr18 36343 0.05% 71
chr19 119263 0.20% 222
chr20 50414 0.08% 99
chr21 25640 0.05% 54
chr22 53907 0.11% 107
chrX 6621 <0.01% 14
chrY 325 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 3897 195 3195 513.8 446
global segment-length histogram

Files

Filename Size md5
ENCFF442KRP.bed.gz 69.18 KB c00b441a1932d30ddf4a3a16bb7262fc
ENCFF442KRP.tabix.bed.gz 38.33 KB cbc27d50a97456a4a655f9b9811710eb
ENCFF442KRP.tabix.bed.gz.tbi 34.41 KB 195ce4e4be1babcbf6815dafb003b94d
genomic_resource.yaml 2.04 KB e7d5b2389022a6d06d90694f361fd9eb
statistics/