Resource

Id Histone_ChIP-seq/ENCSR101NFYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR101NFY [biosample_summary="Homo sapiens gastrocnemius medialis tissue female adult (53 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR101NFY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0011907/
  • biosample_summary: Homo sapiens gastrocnemius medialis tissue female adult (53 years)
  • date_created: 2017-01-24T04:29:48.092516+00:00
  • date_released: 2017-01-27
  • doi: 10.17989/ENCSR101NFY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR101NFY float

Histone_ChIP-seq_ENCSR101NFY
Histone_ChIP-seq ENCSR101NFY [biosample_summary="Homo sapiens gastrocnemius medialis tissue female adult (53 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR101NFY [1.73, 6.35]
n
2,657,716
mean
3.06
sd
0.544

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 26577160.08% 6601
chr1 272886 0.11% 714
chr2 211407 0.09% 568
chr3 141868 0.07% 380
chr4 77754 0.04% 222
chr5 135403 0.07% 358
chr6 94135 0.06% 262
chr7 83217 0.05% 224
chr8 72268 0.05% 187
chr9 93602 0.07% 235
chr10 108336 0.08% 283
chr11 111446 0.08% 286
chr12 180320 0.14% 437
chr13 34259 0.03% 96
chr14 80588 0.08% 230
chr15 73833 0.07% 207
chr16 105641 0.12% 261
chr17 129219 0.16% 332
chr18 37774 0.05% 106
chr19 484438 0.83% 878
chr20 48130 0.07% 127
chr21 25685 0.05% 59
chr22 39904 0.08% 107
chrX 15603 0.01% 42
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 6601 180 3272 402.62 333
global segment-length histogram

Files

Filename Size md5
ENCFF343DAX.bed.gz 128.05 KB 808b4f6de0630257af03131a9132a3c0
ENCFF343DAX.tabix.bed.gz 68.56 KB 7992fb3631351509347ac6748c23cea3
ENCFF343DAX.tabix.bed.gz.tbi 44.93 KB a77e852560fc6f918ce306ec7b7a0821
genomic_resource.yaml 1.76 KB e4e0335328d0c0d8ce3c7e0cd24496d8
statistics/