Resource

Id Histone_ChIP-seq/ENCSR095NSVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR095NSV [biosample_summary="Homo sapiens with Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (86 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR095NSV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (86 years)
  • date_created: 2021-01-28T04:10:54.729942+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR095NSV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (86 years) with Cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR095NSV float

Histone_ChIP-seq_ENCSR095NSV
Histone_ChIP-seq ENCSR095NSV [biosample_summary="Homo sapiens with Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (86 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR095NSV [1.57, 11.7]
n
23,965,640
mean
4.41
sd
1.65

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 239656400.74% 30574
chr1 1050053 0.42% 1096
chr2 1120730 0.46% 1081
chr3 449984 0.23% 483
chr4 690183 0.36% 641
chr5 871326 0.48% 853
chr6 1263495 0.74% 1165
chr7 884513 0.56% 721
chr8 638170 0.44% 700
chr9 513826 0.37% 484
chr10 877183 0.66% 914
chr11 535481 0.40% 594
chr12 774797 0.58% 724
chr13 345676 0.30% 343
chr14 644483 0.60% 674
chr15 507373 0.50% 577
chr16 488099 0.54% 557
chr17 901851 1.08% 810
chr18 273385 0.34% 295
chr19 549144 0.94% 654
chr20 451398 0.70% 508
chr21 205151 0.44% 240
chr22 181507 0.36% 237
chrX 9747832 6.25% 16223
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 30574 200 29222 783.86 535
global segment-length histogram

Files

Filename Size md5
ENCFF258VXT.bed.gz 552.01 KB 249a3fdbe367be86f7774eaf36b7edf9
ENCFF258VXT.tabix.bed.gz 294.31 KB 0bfe9acc5b6a1b3cff67cbf83c5b6e3b
ENCFF258VXT.tabix.bed.gz.tbi 103.25 KB 8073c8a43e43f5c9e364ef23013c636c
genomic_resource.yaml 1.7 KB 143051676805798ed7ed1d7265fcab1d
statistics/