Resource

Id Histone_ChIP-seq/ENCSR092IWZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR092IWZ [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (83 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR092IWZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (83 years)
  • date_created: 2021-01-28T04:11:00.922304+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR092IWZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (83 years) with mild cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR092IWZ float

Histone_ChIP-seq_ENCSR092IWZ
Histone_ChIP-seq ENCSR092IWZ [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (83 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR092IWZ [1.63, 11.1]
n
31,655,483
mean
4.19
sd
1.36

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 316554830.98% 35710
chr1 1066271 0.43% 1022
chr2 1128598 0.47% 992
chr3 435243 0.22% 413
chr4 676412 0.36% 570
chr5 873458 0.48% 696
chr6 1305210 0.76% 1004
chr7 870729 0.55% 652
chr8 615250 0.42% 580
chr9 512677 0.37% 437
chr10 881936 0.66% 773
chr11 501469 0.37% 484
chr12 761503 0.57% 634
chr13 398055 0.35% 368
chr14 787189 0.74% 752
chr15 538886 0.53% 573
chr16 617999 0.68% 670
chr17 928867 1.12% 758
chr18 294358 0.37% 286
chr19 639569 1.09% 710
chr20 554702 0.86% 567
chr21 272547 0.58% 293
chr22 217948 0.43% 284
chrX 16776607 10.75% 22192
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 35710 195 30572 886.46 647
global segment-length histogram

Files

Filename Size md5
ENCFF218KRJ.bed.gz 664.33 KB e3ad31c9a9141e74e7b3a56223d4d630
ENCFF218KRJ.tabix.bed.gz 349.13 KB d31cccb7c001f962e1a91707085c7aee
ENCFF218KRJ.tabix.bed.gz.tbi 99.16 KB 1bfcac859c6811d5f06c74da35f1b05d
genomic_resource.yaml 1.73 KB 45069d84f4a73ef02a11308b30eaeaa4
statistics/