Histone_ChIP-seq_ENCSR091QXP
Histone_ChIP-seq ENCSR091QXP [biosample_summary="Homo sapiens HCT116" and target="H3K36me3"]
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| Id: | Histone_ChIP-seq/ENCSR091QXP |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR091QXP [biosamplesummary="Homo sapiens HCT116" and target="H3K36me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN624IUA|/analyses/ENCAN624IUA/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_internal_action: Released analysis {ENCAN624IUA|/analyses/ENCAN624IUA/} has in progress subobject document {1e2da7bb-8e9e-4094-85b8-ce974f60b158|/documents/1e2da7bb-8e9e-4094-85b8-ce974f60b158/} audit_not_compliant: Processed alignments file {ENCFF702LON|/files/ENCFF702LON/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 20329316 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF688WBJ|/files/ENCFF688WBJ/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 21967401 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR091QXP | float |
Histone_ChIP-seq_ENCSR091QXP |
Histone_ChIP-seq ENCSR091QXP [biosample_summary="Homo sapiens HCT116" and target="H3K36me3"]
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[1.75, 15.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF137TPC.bed.gz | 1.41 MB | bd076c781f817a09cc00c402c19316ac |
| ENCFF137TPC.bed.gz.dvc | 101.0 B | 4bc05a2e7a361c199ce470cd5ec1d5a8 |
| ENCFF137TPC.tabix.bed.gz | 694.17 KB | b4161dbdd508df43ba965f5fa4828a1f |
| ENCFF137TPC.tabix.bed.gz.dvc | 106.0 B | 8b8b0f16b285f66c6e5642f4b9f47651 |
| ENCFF137TPC.tabix.bed.gz.tbi | 130.39 KB | 37c94a4a7f7a38fb8eda87f6e91840b7 |
| ENCFF137TPC.tabix.bed.gz.tbi.dvc | 110.0 B | 95d7385f18bc368e11aa5ffc1a61f7f3 |
| genomic_resource.yaml | 2.8 KB | 828327640c1d1201bef8162171e660b9 |
| genomic_resource_original.yaml | 2.69 KB | 0d0e1c0eb52e0d351081fdc0549cd3fc |
| statistics/ |