Resource

Id Histone_ChIP-seq/ENCSR078ZGCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR078ZGC [biosample_summary="Homo sapiens esophagus squamous epithelium tissue female adult (53 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR078ZGC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006920/
  • biosample_summary: Homo sapiens esophagus squamous epithelium tissue female adult (53 years)
  • date_created: 2016-10-22T16:11:05.823318+00:00
  • date_released: 2016-11-07
  • doi: 10.17989/ENCSR078ZGC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR078ZGC float

Histone_ChIP-seq_ENCSR078ZGC
Histone_ChIP-seq ENCSR078ZGC [biosample_summary="Homo sapiens esophagus squamous epithelium tissue female adult (53 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR078ZGC [1.51, 7.43]
n
41,793,149
mean
3.42
sd
0.77

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 417931491.30% 46092
chr1 4456354 1.79% 4841
chr2 2695325 1.11% 3243
chr3 2306802 1.16% 2591
chr4 1172382 0.62% 1528
chr5 1765669 0.97% 2129
chr6 1603490 0.94% 1924
chr7 1807978 1.13% 2106
chr8 1141245 0.79% 1373
chr9 1933373 1.40% 2053
chr10 1718987 1.28% 2025
chr11 2309578 1.71% 2407
chr12 2565234 1.92% 2702
chr13 565823 0.49% 759
chr14 1478165 1.38% 1669
chr15 1410895 1.38% 1675
chr16 2427722 2.69% 2439
chr17 3011884 3.62% 3021
chr18 492239 0.61% 662
chr19 3250977 5.55% 3008
chr20 1417272 2.20% 1539
chr21 557853 1.19% 639
chr22 1432211 2.82% 1407
chrX 271691 0.17% 352
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 46092 250 15634 906.73 688
global segment-length histogram

Files

Filename Size md5
ENCFF636TIN.bed.gz 907.48 KB b1636ed3f92838bad48b83203de21b7d
ENCFF636TIN.tabix.bed.gz 466.63 KB 8e9f31762464df395dd7aef34050be3b
ENCFF636TIN.tabix.bed.gz.tbi 116.46 KB 981b6825605ed71649c5c57d008ef388
genomic_resource.yaml 1.57 KB e1bd48e932c52dc28a29f64ab117dd73
statistics/