Resource

Id Histone_ChIP-seq/ENCSR078BHKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR078BHK [biosample_summary="Homo sapiens spleen tissue female adult (30 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR078BHK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue female adult (30 years)
  • date_created: 2015-10-01T07:17:04.578011+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR078BHK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (30 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR078BHK float

Histone_ChIP-seq_ENCSR078BHK
Histone_ChIP-seq ENCSR078BHK [biosample_summary="Homo sapiens spleen tissue female adult (30 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR078BHK [1.81, 36.5]
n
89,688,901
mean
6.3
sd
2.51

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 896889012.79% 158512
chr1 9041485 3.63% 15388
chr1_KI270711v1_random 415 0.98% 1
chr2 7368590 3.04% 13463
chr3 5927992 2.99% 10859
chr4 3697898 1.94% 7277
chr5 4720679 2.60% 8793
chr6 4425757 2.59% 8139
chr7 3932036 2.47% 7335
chr8 3138082 2.16% 5972
chr9 3863242 2.79% 6570
chr10 3848532 2.88% 7081
chr11 4583573 3.39% 7672
chr12 5226405 3.92% 8987
chr13 1992583 1.74% 3911
chr14 3279333 3.06% 5820
chr15 3552662 3.48% 6288
chr16 3549327 3.93% 5723
chr17 4646127 5.58% 7554
chr18 1505880 1.87% 2987
chr19 4566028 7.79% 6931
chr20 2604950 4.04% 4147
chr21 1034811 2.22% 1862
chr22 1927672 3.79% 3096
chrUn_GL000219v1 1593 0.89% 6
chrX 1253249 0.80% 2650
3341 contigs with no values (186083092 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 158512 170 13075 565.82 414
global segment-length histogram

Files

Filename Size md5
ENCFF294HWV.bed.gz 2.99 MB 542d339c45faa5220558cc99848be091
ENCFF294HWV.tabix.bed.gz 1.48 MB 1bb7d931bb98c2b2b38902d486f32ade
ENCFF294HWV.tabix.bed.gz.tbi 190.35 KB ab2654f49ed092acad0497aeff3909e8
genomic_resource.yaml 1.98 KB 9637a07d7c6b9a6885c497b189ec94e7
statistics/