Resource

Id Histone_ChIP-seq/ENCSR067BGScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR067BGS [biosample_summary="Homo sapiens with Alzheimer''s disease, Cognitive impairment; dorsolateral prefrontal cortex tissue male adult (87 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR067BGS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Alzheimer's disease, Cognitive impairment; dorsolateral prefrontal cortex tissue male adult (87 years)
  • date_created: 2021-04-30T04:18:20.848474+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR067BGS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (87 years) with Alzheimer's disease, Cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR067BGS float

Histone_ChIP-seq_ENCSR067BGS
Histone_ChIP-seq ENCSR067BGS [biosample_summary="Homo sapiens with Alzheimer''s disease, Cognitive impairment; dorsolateral prefrontal cortex tissue male adult (87 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR067BGS [1.47, 63.3]
n
114,903,676
mean
10.1
sd
7.54

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1149036763.57% 89514
chr1 11633746 4.67% 8803
chr2 8311742 3.43% 6794
chr3 6956924 3.51% 5438
chr4 4463007 2.35% 3618
chr5 6057372 3.34% 4818
chr6 6053087 3.54% 4748
chr7 5183229 3.25% 4347
chr8 4827394 3.33% 3933
chr9 5380224 3.89% 3981
chr10 6132531 4.58% 4579
chr11 6950370 5.15% 5138
chr12 5813782 4.36% 4686
chr13 2650483 2.32% 2135
chr14 3841261 3.59% 2891
chr15 4004795 3.93% 3158
chr16 3971666 4.40% 3123
chr17 6430139 7.72% 4658
chr18 2238658 2.79% 1868
chr19 4764453 8.13% 3473
chr20 3314452 5.14% 2529
chr21 1305946 2.80% 1033
chr22 2777460 5.47% 2109
chrX 1797173 1.15% 1619
chrY 43782 0.08% 35
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 89514 215 62370 1283.64 790
global segment-length histogram

Files

Filename Size md5
ENCFF756JDB.bed.gz 1.94 MB 08cbc89e78c67accc2d6f0fbe4311fd8
ENCFF756JDB.tabix.bed.gz 929.14 KB e15eb140f77b0ee60ee9e192888ccb4d
ENCFF756JDB.tabix.bed.gz.tbi 270.63 KB cdd2f9f7ecb4d92adfd6aba077cc39c4
genomic_resource.yaml 1.81 KB 3ac80ffc7b9145cd6948779f00ffd088
statistics/