Resource

Id Histone_ChIP-seq/ENCSR066SQUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR066SQU [biosample_summary="Homo sapiens heart left ventricle tissue male adult (54 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR066SQU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue male adult (54 years)
  • date_created: 2021-08-25T18:08:06.645252+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR066SQU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR066SQU float

Histone_ChIP-seq_ENCSR066SQU
Histone_ChIP-seq ENCSR066SQU [biosample_summary="Homo sapiens heart left ventricle tissue male adult (54 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR066SQU [1.44, 12.2]
n
54,982,727
mean
4.28
sd
1.69

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 549827271.71% 56794
chr1 5711774 2.29% 5911
chr2 4190981 1.73% 4414
chr3 1954436 0.99% 2132
chr4 2041902 1.07% 2024
chr5 2800993 1.54% 2658
chr6 3506578 2.05% 3174
chr7 2883422 1.81% 2809
chr8 2323709 1.60% 2498
chr9 2140729 1.55% 2166
chr10 3011107 2.25% 3087
chr11 2597784 1.92% 2970
chr12 2797861 2.10% 2979
chr13 1349663 1.18% 1389
chr14 1976085 1.85% 2112
chr15 1607361 1.58% 1799
chr16 1882216 2.08% 2080
chr17 3393888 4.08% 3188
chr18 970921 1.21% 1102
chr19 2791176 4.76% 2865
chr20 2666480 4.14% 2792
chr21 582611 1.25% 619
chr22 1543064 3.04% 1784
chrX 255318 0.16% 238
chrY 2668 <0.01% 4
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 56794 215 42510 968.11 624
global segment-length histogram

Files

Filename Size md5
ENCFF470APK.bed.gz 1.01 MB 03b6d0623a327db6d82705fe222ee502
ENCFF470APK.tabix.bed.gz 538.37 KB 2ebff48624b1586145fe4bafaddeb443
ENCFF470APK.tabix.bed.gz.tbi 153.56 KB f07dcb9da1cda050b168c0f6233a1113
genomic_resource.yaml 1.53 KB bcc37dc67b2b7253f47e363b62cec44d
statistics/