Resource

Id Histone_ChIP-seq/ENCSR066GUYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR066GUY [biosample_summary="Homo sapiens placental basal plate tissue male embryo (38 weeks)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR066GUY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_NTR_0003013/
  • biosample_summary: Homo sapiens placental basal plate tissue male embryo (38 weeks)
  • date_created: 2017-03-22T16:16:59.228198+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR066GUY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (38 weeks)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR066GUY float

Histone_ChIP-seq_ENCSR066GUY
Histone_ChIP-seq ENCSR066GUY [biosample_summary="Homo sapiens placental basal plate tissue male embryo (38 weeks)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR066GUY [1.82, 14.4]
n
26,291,080
mean
5.25
sd
1.71

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 262910800.82% 42431
chr1 2940990 1.18% 4627
chr2 1903526 0.79% 3091
chr3 1599395 0.81% 2649
chr4 843623 0.44% 1440
chr5 1190732 0.66% 1996
chr6 1347486 0.79% 2324
chr7 1398391 0.88% 2296
chr8 1046645 0.72% 1708
chr9 1273115 0.92% 1993
chr10 1118472 0.84% 1842
chr11 1600104 1.18% 2501
chr12 1209226 0.91% 1983
chr13 415939 0.36% 735
chr14 1094649 1.02% 1752
chr15 860602 0.84% 1400
chr16 1140817 1.26% 1763
chr17 1455618 1.75% 2154
chr18 369871 0.46% 652
chr19 1361061 2.32% 2160
chr20 840954 1.30% 1299
chr21 281541 0.60% 478
chr22 806793 1.59% 1172
chrX 188143 0.12% 410
chrY 3387 0.01% 6
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 42431 195 8443 619.62 494
global segment-length histogram

Files

Filename Size md5
ENCFF457YRY.bed.gz 850.92 KB 622c3c5fcb0da898af25a4ff617ce960
ENCFF457YRY.tabix.bed.gz 427.04 KB 35363cfae6c4492e132ef06311f31965
ENCFF457YRY.tabix.bed.gz.tbi 139.52 KB b881118107d07cfb19963b51587040af
genomic_resource.yaml 1.53 KB d6b5a01738043b17aabc846f759e1e65
statistics/