Histone_ChIP-seq_ENCSR065HOR
Histone_ChIP-seq ENCSR065HOR [biosample_summary="Homo sapiens mesenchymal stem cell originated from H1" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR065HOR |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR065HOR [biosamplesummary="Homo sapiens mesenchymal stem cell originated from H1" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: male embryo output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN986XFK|/analyses/ENCAN986XFK/} has in progress subobject document {1d55ad46-9066-403c-a725-6aa4dafaa833|/documents/1d55ad46-9066-403c-a725-6aa4dafaa833/} audit_internal_action: Released analysis {ENCAN986XFK|/analyses/ENCAN986XFK/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF362KVF|/files/ENCFF362KVF/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 7991893 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_warning: Processed alignments file {ENCFF250JXU|/files/ENCFF250JXU/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 39382995 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR065HOR | float |
Histone_ChIP-seq_ENCSR065HOR |
Histone_ChIP-seq ENCSR065HOR [biosample_summary="Homo sapiens mesenchymal stem cell originated from H1" and target="H3K4me1"]
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[1.66, 26.5] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF905PYL.bed.gz | 4.63 MB | d4a6bd6f3c120385494105a8ccac28c8 |
| ENCFF905PYL.bed.gz.dvc | 101.0 B | ebade5ba7215fcada25afb4cee8547e8 |
| ENCFF905PYL.tabix.bed.gz | 2.1 MB | 3938368e53f356f7f0cfc8b0f413ebbd |
| ENCFF905PYL.tabix.bed.gz.dvc | 107.0 B | c07f8c53d394708608a8b4216ae20c75 |
| ENCFF905PYL.tabix.bed.gz.tbi | 441.64 KB | 339e5119168823d0d916ae6960a379a8 |
| ENCFF905PYL.tabix.bed.gz.tbi.dvc | 110.0 B | 99af142cfb0d0003a70dd7726acc0ad2 |
| genomic_resource.yaml | 2.69 KB | 424adb3ec9306bfb3c7f0349e7817109 |
| genomic_resource_original.yaml | 2.55 KB | 24a7312d3c47d403b880e38feed162e2 |
| statistics/ |