Histone_ChIP-seq_ENCSR064VLH
Histone_ChIP-seq ENCSR064VLH [biosample_summary="Homo sapiens germinal matrix tissue male embryo (20 weeks)" and target="H3K4me1"]
×
| Id: | Histone_ChIP-seq/ENCSR064VLH |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR064VLH [biosamplesummary="Homo sapiens germinal matrix tissue male embryo (20 weeks)" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (20 weeks) output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN248OTC|/analyses/ENCAN248OTC/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_not_compliant: Processed redacted alignments file {ENCFF841KGA|/files/ENCFF841KGA/} processed by ChIP-seq ENCODE4 v1.7.0 GRCh38 pipeline has 25861050 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR064VLH | float |
Histone_ChIP-seq_ENCSR064VLH |
Histone_ChIP-seq ENCSR064VLH [biosample_summary="Homo sapiens germinal matrix tissue male embryo (20 weeks)" and target="H3K4me1"]
|
|
[1.84, 14.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF480OPN.bed.gz | 1.82 MB | b2dca21945ae256488b29ef7326d42cf |
| ENCFF480OPN.bed.gz.dvc | 101.0 B | b3cb3036509b047a506276551efac1f8 |
| ENCFF480OPN.tabix.bed.gz | 968.79 KB | f37512ad5fa0b9059c9e7a0ecd94628e |
| ENCFF480OPN.tabix.bed.gz.dvc | 106.0 B | a0de0e5975c0869916a3c1b1614a9b5f |
| ENCFF480OPN.tabix.bed.gz.tbi | 334.62 KB | 0186246c5b61331b8a6283110bf9bb31 |
| ENCFF480OPN.tabix.bed.gz.tbi.dvc | 110.0 B | 949e638930b54e5f55bbc1a76d69369d |
| genomic_resource.yaml | 2.01 KB | 6b583db4a7d2f345a97ce72f372433fd |
| genomic_resource_original.yaml | 1.87 KB | b1e02abfb23f34cda4642fb2a889740e |
| statistics/ |