Resource

Id Histone_ChIP-seq/ENCSR064PTXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR064PTX [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (89 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR064PTX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Alzheimer's disease; dorsolateral prefrontal cortex tissue female adult (89 years)
  • date_created: 2021-04-30T04:18:06.294266+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR064PTX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (89 years) with Alzheimer's disease
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR064PTX float

Histone_ChIP-seq_ENCSR064PTX
Histone_ChIP-seq ENCSR064PTX [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (89 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR064PTX [1.65, 9.02]
n
16,002,336
mean
3.94
sd
1.21

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 160023360.50% 22409
chr1 669500 0.27% 729
chr2 752892 0.31% 723
chr3 268673 0.14% 329
chr4 477280 0.25% 459
chr5 603548 0.33% 579
chr6 867803 0.51% 858
chr7 635617 0.40% 512
chr8 406962 0.28% 445
chr9 345515 0.25% 348
chr10 582376 0.44% 626
chr11 309608 0.23% 350
chr12 503939 0.38% 493
chr13 265303 0.23% 279
chr14 445041 0.42% 518
chr15 364210 0.36% 464
chr16 349672 0.39% 428
chr17 650463 0.78% 622
chr18 185898 0.23% 208
chr19 339495 0.58% 468
chr20 339345 0.53% 434
chr21 174409 0.37% 240
chr22 106145 0.21% 157
chrX 6358642 4.07% 12140
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 22409 195 18628 714.1 483
global segment-length histogram

Files

Filename Size md5
ENCFF318CAY.bed.gz 406.14 KB 146e55339afb10c4fb4c897b1f4f96b5
ENCFF318CAY.tabix.bed.gz 217.5 KB 841ce1438082fa94251e647d2ef655e9
ENCFF318CAY.tabix.bed.gz.tbi 79.93 KB 6f7540124c93c48f73858d89563a3965
genomic_resource.yaml 1.71 KB 2988d6ffa53745a33043feb91a73cf75
statistics/