Resource

Id Histone_ChIP-seq/ENCSR062ARLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR062ARL [biosample_summary="Homo sapiens duodenal mucosa tissue male adult (59 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR062ARL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000320/
  • biosample_summary: Homo sapiens duodenal mucosa tissue male adult (59 years)
  • date_created: 2015-09-15T19:51:47.566457+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR062ARL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR062ARL float

Histone_ChIP-seq_ENCSR062ARL
Histone_ChIP-seq ENCSR062ARL [biosample_summary="Homo sapiens duodenal mucosa tissue male adult (59 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR062ARL [1.9, 17]
n
21,731,100
mean
6.1
sd
2.33

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 217311000.68% 24392
chr1 2166052 0.87% 2528
chr2 1783104 0.74% 1942
chr3 1039199 0.52% 1222
chr4 888775 0.47% 915
chr5 1296733 0.71% 1430
chr6 1425230 0.83% 1489
chr7 1098660 0.69% 1136
chr8 919021 0.63% 1095
chr9 960819 0.69% 1063
chr10 1253299 0.94% 1346
chr11 1156999 0.86% 1340
chr12 1151411 0.86% 1271
chr13 521209 0.46% 549
chr14 666644 0.62% 757
chr15 754037 0.74% 903
chr16 559517 0.62% 652
chr17 1352071 1.62% 1486
chr18 334996 0.42% 421
chr19 811371 1.38% 929
chr20 839295 1.30% 1025
chr21 206066 0.44% 242
chr22 390019 0.77% 477
chrX 154028 0.10% 172
chrY 2545 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 24392 210 21752 890.91 628
global segment-length histogram

Files

Filename Size md5
ENCFF027UML.bed.gz 497.55 KB 5372bdfd00524aa884b6a5f4d6a13e10
ENCFF027UML.tabix.bed.gz 248.49 KB b50c934ec55587d02c9ad9b98517d669
ENCFF027UML.tabix.bed.gz.tbi 97.34 KB 0586fd15c5d53d0840f1be7fa305f553
genomic_resource.yaml 2.0 KB c57d635018b04c59f21694372d8f50ca
statistics/