Resource

Id Histone_ChIP-seq/ENCSR057XPLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR057XPL [biosample_summary="Homo sapiens muscle layer of duodenum tissue male adult (59 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR057XPL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0012488/
  • biosample_summary: Homo sapiens muscle layer of duodenum tissue male adult (59 years)
  • date_created: 2015-09-15T19:52:37.704133+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR057XPL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR057XPL float

Histone_ChIP-seq_ENCSR057XPL
Histone_ChIP-seq ENCSR057XPL [biosample_summary="Homo sapiens muscle layer of duodenum tissue male adult (59 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR057XPL [1.81, 13.4]
n
9,213,656
mean
4.67
sd
1.37

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 92136560.29% 14679
chr1 545571 0.22% 951
chr1_KI270709v1_random 435 0.65% 1
chr2 538339 0.22% 977
chr2_KI270716v1_random 1179 0.77% 2
chr3 378198 0.19% 681
chr4 460699 0.24% 767
chr4_GL000008v2_random 4073 1.94% 3
chr5 675389 0.37% 1085
chr6 349187 0.20% 641
chr7 498120 0.31% 841
chr8 440716 0.30% 778
chr9 316318 0.23% 504
chr10 465884 0.35% 779
chr11 339157 0.25% 604
chr12 473568 0.36% 749
chr13 190906 0.17% 368
chr14 216465 0.20% 388
chr14_GL000225v1_random 849 0.40% 2
chr15 275217 0.27% 423
chr16 285526 0.32% 447
chr17 189016 0.23% 311
chr17_GL000205v2_random 1319 0.71% 3
chr17_KI270729v1_random 20247 7.21% 29
chr17_KI270730v1_random 3828 3.40% 6
chr18 172696 0.21% 314
chr19 1735475 2.96% 1986
chr20 209131 0.32% 367
chr21 147646 0.32% 231
chr22 94772 0.19% 163
chr22_KI270736v1_random 56576 31.10% 74
chr22_KI270738v1_random 566 0.57% 1
chrUn_GL000216v2 1938 1.10% 4
chrUn_GL000219v1 1160 0.65% 3
chrUn_GL000224v1 3886 2.16% 6
chrUn_KI270435v1 359 0.39% 1
chrUn_KI270438v1 4000 3.56% 7
chrUn_KI270442v1 41753 10.65% 46
chrUn_KI270467v1 285 7.27% 1
chrUn_KI270519v1 1674 1.21% 2
chrUn_KI270584v1 405 8.97% 1
chrUn_KI270589v1 1906 4.29% 4
chrUn_KI270590v1 296 6.32% 1
chrUn_KI270591v1 586 10.11% 1
chrUn_KI270744v1 393 0.23% 1
chrUn_KI270750v1 262 0.18% 1
chrUn_KI270751v1 869 0.58% 1
chrUn_KI270756v1 1538 1.93% 4
chrUn_KI270757v1 1164 1.63% 2
chrX 45842 0.03% 85
chrY 18272 0.03% 32
3316 contigs with no values (125621801 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 14679 215 8321 627.68 503
global segment-length histogram

Files

Filename Size md5
ENCFF613NOC.bed.gz 292.54 KB c266dd310c2d0fcbd84bd1b792b110a5
ENCFF613NOC.tabix.bed.gz 150.35 KB e2bef6356f94d13c2a011a74a255453a
ENCFF613NOC.tabix.bed.gz.tbi 93.56 KB 73d3ce5dcf7c1721ba3c530e0e255313
genomic_resource.yaml 1.54 KB 07899dddb3f5181f03de80e176488453
statistics/