Resource

Id Histone_ChIP-seq/ENCSR057RETcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR057RET [biosample_summary="Homo sapiens angular gyrus tissue female adult (75 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR057RET
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002686/
  • biosample_summary: Homo sapiens angular gyrus tissue female adult (75 years)
  • date_created: 2015-09-15T19:52:24.461257+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR057RET
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (75 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR057RET float

Histone_ChIP-seq_ENCSR057RET
Histone_ChIP-seq ENCSR057RET [biosample_summary="Homo sapiens angular gyrus tissue female adult (75 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR057RET [1.87, 47.1]
n
31,136,368
mean
12
sd
6.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 311363680.97% 40301
chr1 3080282 1.24% 3880
chr2 2136139 0.88% 2798
chr3 1902689 0.96% 2288
chr4 1312627 0.69% 1597
chr5 1566147 0.86% 1986
chr6 1835023 1.07% 2350
chr7 1478598 0.93% 1947
chr8 1226572 0.85% 1605
chr9 1260936 0.91% 1654
chr10 1322531 0.99% 1730
chr11 1689638 1.25% 2126
chr12 1664718 1.25% 2095
chr13 713405 0.62% 929
chr14 1042483 0.97% 1304
chr15 975186 0.96% 1292
chr16 1145904 1.27% 1517
chr17 1646980 1.98% 2182
chr18 556362 0.69% 781
chr19 1951807 3.33% 2589
chr20 781189 1.21% 1035
chr21 297298 0.64% 415
chr22 656970 1.29% 907
chrX 892884 0.57% 1294
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 40301 155 6998 772.6 573
global segment-length histogram

Files

Filename Size md5
ENCFF770ZSA.bed.gz 924.93 KB 69cee60712bf14f7a120c8b5a911f67e
ENCFF770ZSA.tabix.bed.gz 427.23 KB c7ba5b537fcf4b55d0ad4826e205d3d0
ENCFF770ZSA.tabix.bed.gz.tbi 177.04 KB 65f3545b2a9a10e494b8949467d09246
genomic_resource.yaml 1.51 KB 9dc3f8abdd7d7345757fd719e7a1a8c8
statistics/