Resource

Id Histone_ChIP-seq/ENCSR057BFOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR057BFO [biosample_summary="Homo sapiens esophagus squamous epithelium tissue female adult (53 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR057BFO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006920/
  • biosample_summary: Homo sapiens esophagus squamous epithelium tissue female adult (53 years)
  • date_created: 2017-01-24T04:40:37.334307+00:00
  • date_released: 2017-01-27
  • doi: 10.17989/ENCSR057BFO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR057BFO float

Histone_ChIP-seq_ENCSR057BFO
Histone_ChIP-seq ENCSR057BFO [biosample_summary="Homo sapiens esophagus squamous epithelium tissue female adult (53 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR057BFO [1.49, 9.42]
n
2,354,399
mean
3.7
sd
0.823

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 23543990.07% 7061
chr1 199255 0.08% 593
chr2 221800 0.09% 605
chr3 82044 0.04% 259
chr4 92012 0.05% 292
chr5 106607 0.06% 329
chr6 143412 0.08% 436
chr7 159453 0.10% 418
chr8 86011 0.06% 249
chr9 109273 0.08% 295
chr10 147507 0.11% 390
chr11 89119 0.07% 290
chr12 104613 0.08% 300
chr13 69715 0.06% 196
chr14 65072 0.06% 200
chr15 73927 0.07% 218
chr16 61252 0.07% 200
chr17 177594 0.21% 451
chr18 33273 0.04% 96
chr19 144089 0.25% 461
chr20 65952 0.10% 221
chr21 19630 0.04% 74
chr22 32681 0.06% 100
chrX 69935 0.04% 387
chrY 173 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 7061 110 4967 333.44 248
global segment-length histogram

Files

Filename Size md5
ENCFF886AAQ.bed.gz 124.26 KB 2e4c7bc8e2642a87faa5856d228ddeb6
ENCFF886AAQ.tabix.bed.gz 67.35 KB d85dfd932cdccfff950ec0d6c938a594
ENCFF886AAQ.tabix.bed.gz.tbi 36.41 KB 157f1c54accde63a649c53239c37ba63
genomic_resource.yaml 1.57 KB daf79d822b8e6c2a71454aa40f7c82ad
statistics/