Histone_ChIP-seq_ENCSR055ZZY
Histone_ChIP-seq ENCSR055ZZY [biosample_summary="Homo sapiens IMR-90" and target="H3K9me3"]
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| Id: | Histone_ChIP-seq/ENCSR055ZZY |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR055ZZY [biosamplesummary="Homo sapiens IMR-90" and target="H3K9me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN936FUZ|/analyses/ENCAN936FUZ/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed unfiltered alignments file {ENCFF936HMP|/files/ENCFF936HMP/} processed by ChIP-seq ENCODE3 hg19 pipeline has 26929547 mapped reads. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me3-human and investigated as a broad histone mark is 35 million mapped reads. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed unfiltered alignments file {ENCFF196MWI|/files/ENCFF196MWI/} processed by ChIP-seq ENCODE3 hg19 pipeline has 29386615 mapped reads. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me3-human and investigated as a broad histone mark is 35 million mapped reads. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed unfiltered alignments file {ENCFF899BYS|/files/ENCFF899BYS/} processed by ChIP-seq ENCODE3 hg19 pipeline has 29386615 mapped reads. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me3-human and investigated as a broad histone mark is 35 million mapped reads. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR055ZZY | float |
Histone_ChIP-seq_ENCSR055ZZY |
Histone_ChIP-seq ENCSR055ZZY [biosample_summary="Homo sapiens IMR-90" and target="H3K9me3"]
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[1.59, 27.1] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF872UDE.bed.gz | 2.73 MB | 04dc846bb36c08ec3c4cbcccc871243b |
| ENCFF872UDE.bed.gz.dvc | 101.0 B | 12bbf036764019e4b9780a72bebf4a90 |
| ENCFF872UDE.tabix.bed.gz | 1.44 MB | a9e9f2b45e4039524d423c0742104b4f |
| ENCFF872UDE.tabix.bed.gz.dvc | 107.0 B | 187dde0a2b5525856bc8f9a89c5e7f18 |
| ENCFF872UDE.tabix.bed.gz.tbi | 352.59 KB | 0b37454b2f596b0d82cb4d30eb717647 |
| ENCFF872UDE.tabix.bed.gz.tbi.dvc | 110.0 B | 9a6df462fbc01001537ef80add9004ae |
| genomic_resource.yaml | 2.87 KB | 6e7305bad4cbeee626a4ac83b0caf481 |
| genomic_resource_original.yaml | 2.76 KB | b6e805ad81a826146e4877cb185263a5 |
| statistics/ |