Resource

Id Histone_ChIP-seq/ENCSR050LBScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR050LBS [biosample_summary="Homo sapiens upper lobe of left lung tissue male adult (54 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR050LBS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008952/
  • biosample_summary: Homo sapiens upper lobe of left lung tissue male adult (54 years)
  • date_created: 2017-12-06T21:07:17.648211+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR050LBS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR050LBS float

Histone_ChIP-seq_ENCSR050LBS
Histone_ChIP-seq ENCSR050LBS [biosample_summary="Homo sapiens upper lobe of left lung tissue male adult (54 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR050LBS [1.32, 7.27]
n
25,066,581
mean
3.32
sd
1.02

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 250665810.78% 9695
chr1 2333919 0.94% 974
chr1_KI270712v1_random 4503 2.56% 2
chr1_KI270713v1_random 2873 7.05% 3
chr2 1784562 0.74% 607
chr3 894970 0.45% 362
chr4 1024221 0.54% 347
chr5 1448050 0.80% 532
chr6 1590832 0.93% 585
chr7 1396221 0.88% 513
chr8 1008946 0.70% 389
chr9 1125490 0.81% 432
chr10 1315121 0.98% 493
chr11 1261583 0.93% 512
chr12 1258971 0.94% 487
chr13 548904 0.48% 189
chr14 760546 0.71% 284
chr15 778311 0.76% 315
chr16 833235 0.92% 343
chr17 1648475 1.98% 636
chr17_GL000205v2_random 21210 11.43% 14
chr18 385018 0.48% 155
chr19 1605916 2.74% 627
chr20 1121510 1.74% 470
chr21 223916 0.48% 90
chr22 567740 1.12% 269
chr22_KI270733v1_random 1832 1.02% 2
chrUn_GL000219v1 1947 1.09% 2
chrUn_KI270744v1 715 0.42% 1
chrX 117044 0.08% 60
3337 contigs with no values (185374679 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 9695 550 100755 2585.52 1678
global segment-length histogram

Files

Filename Size md5
ENCFF185PBI.bed.gz 208.12 KB 075e363378cc0e7cf080f7a901176c30
ENCFF185PBI.tabix.bed.gz 107.6 KB c5de6768f399a3a13ade1bdc751a9f95
ENCFF185PBI.tabix.bed.gz.tbi 62.57 KB fa9cd44f11de393b931dc09c06565cbc
genomic_resource.yaml 1.54 KB bd9e96e64c19c5ad1cae05ff7462e088
statistics/