Histone_ChIP-seq_ENCSR043VGU
Histone_ChIP-seq ENCSR043VGU [biosample_summary="Homo sapiens H9" and target="H3K4me3"]
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| Id: | Histone_ChIP-seq/ENCSR043VGU |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR043VGU [biosamplesummary="Homo sapiens H9" and target="H3K4me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_error: Processed alignments file {ENCFF190YKE|/files/ENCFF190YKE/} processed by ChIP-seq ENCODE3 hg19 pipeline has 3439187 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me3-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_internal_action: Archived analysis {ENCAN342BVY|/analyses/ENCAN342BVY/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF955YGZ|/files/ENCFF955YGZ/} processed by ChIP-seq ENCODE3 hg19 pipeline has 8056387 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me3-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR043VGU | float |
Histone_ChIP-seq_ENCSR043VGU |
Histone_ChIP-seq ENCSR043VGU [biosample_summary="Homo sapiens H9" and target="H3K4me3"]
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[2.21, 100] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF719ESQ.bed.gz | 977.66 KB | 03bd11014572dc9a09c6ad6f55ee39e9 |
| ENCFF719ESQ.bed.gz.dvc | 101.0 B | 8b76e23511e5a2d1ed37525c627adb3f |
| ENCFF719ESQ.tabix.bed.gz | 420.39 KB | 2b9c351508e9918bbecdba1062fea71c |
| ENCFF719ESQ.tabix.bed.gz.dvc | 106.0 B | a4ce0af4fd0562e3696eb9693fc2531f |
| ENCFF719ESQ.tabix.bed.gz.tbi | 159.44 KB | d4c763d77ab25a04daa7b41056fc16c1 |
| ENCFF719ESQ.tabix.bed.gz.tbi.dvc | 110.0 B | d21130c46ff847243b0e3b08fa9818f4 |
| genomic_resource.yaml | 2.54 KB | a5324f9e418522cc3ff333eac4a4c3b9 |
| genomic_resource_original.yaml | 2.43 KB | 8c87759fd8c9d5069185248d8668dca8 |
| statistics/ |