Resource

Id Histone_ChIP-seq/ENCSR039WOAcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR039WOA [biosample_summary="Homo sapiens BLaER1 24 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR039WOA
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 24 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:40.878282+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR039WOA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 24 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR039WOA float

Histone_ChIP-seq_ENCSR039WOA
Histone_ChIP-seq ENCSR039WOA [biosample_summary="Homo sapiens BLaER1 24 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR039WOA [1.28, 24.4]
n
150,059,539
mean
5.37
sd
2.85

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1500595394.66% 199201
chr1 10415731 4.18% 14033
chr1_KI270706v1_random 11891 6.79% 20
chr1_KI270707v1_random 2611 8.15% 4
chr1_KI270708v1_random 29626 23.20% 34
chr1_KI270709v1_random 20740 31.02% 21
chr1_KI270710v1_random 1857 4.62% 4
chr1_KI270712v1_random 4683 2.66% 2
chr1_KI270713v1_random 885 2.17% 1
chr1_KI270714v1_random 1553 3.72% 1
chr2 11450009 4.73% 15821
chr2_KI270715v1_random 253 0.16% 1
chr2_KI270716v1_random 8786 5.71% 6
chr3 9241705 4.66% 13359
chr3_GL000221v1_random 5240 3.37% 15
chr4 8236025 4.33% 11680
chr4_GL000008v2_random 11024 5.26% 13
chr5 9243019 5.09% 12644
chr5_GL000208v1_random 3826 4.13% 8
chr6 7434714 4.35% 10887
chr7 9130311 5.73% 11869
chr8 9510223 6.55% 11778
chr9 5517628 3.99% 7652
chr9_KI270719v1_random 5583 3.16% 8
chr9_KI270720v1_random 1224 3.13% 3
chr10 7280704 5.44% 9643
chr11 5832166 4.32% 7818
chr12 6918534 5.19% 8873
chr13 4684516 4.10% 6955
chr14 4474979 4.18% 6162
chr14_GL000009v2_random 6733 3.34% 12
chr14_GL000194v1_random 12466 6.51% 16
chr14_GL000225v1_random 101123 47.89% 132
chr14_KI270722v1_random 21800 11.23% 38
chr14_KI270723v1_random 5050 13.25% 5
chr14_KI270724v1_random 4342 10.98% 5
chr14_KI270725v1_random 5001 2.89% 7
chr15 4033422 3.95% 5544
chr15_KI270727v1_random 250 0.06% 1
chr16 3864888 4.28% 4798
chr16_KI270728v1_random 51136 2.73% 72
chr17 3344745 4.02% 4103
chr17_GL000205v2_random 12673 6.83% 21
chr17_KI270729v1_random 208159 74.12% 28
chr17_KI270730v1_random 32490 28.87% 19
chr18 3366652 4.19% 4780
chr19 8368087 14.28% 6242
chr20 3031200 4.70% 4013
chr21 2482396 5.31% 3120
chr22 1677086 3.30% 2096
chr22_KI270732v1_random 4068 9.79% 5
chr22_KI270733v1_random 21590 12.01% 39
chr22_KI270735v1_random 5406 12.63% 4
chr22_KI270736v1_random 126642 69.61% 41
chr22_KI270737v1_random 71104 68.48% 35
chr22_KI270738v1_random 59693 60.07% 13
chr22_KI270739v1_random 250 0.34% 1
chrUn_GL000195v1 2009 1.10% 5
chrUn_GL000213v1 1870 1.14% 5
chrUn_GL000214v1 11491 8.34% 21
chrUn_GL000216v2 111640 63.21% 58
chrUn_GL000218v1 2504 1.55% 5
chrUn_GL000219v1 14476 8.08% 16
chrUn_GL000220v1 9686 5.99% 12
chrUn_GL000224v1 94198 52.42% 81
chrUn_KI270304v1 260 12.01% 1
chrUn_KI270320v1 267 6.05% 1
chrUn_KI270330v1 980 59.32% 2
chrUn_KI270333v1 254 9.41% 1
chrUn_KI270435v1 21703 23.34% 44
chrUn_KI270438v1 74886 66.56% 24
chrUn_KI270442v1 133676 34.10% 71
chrUn_KI270448v1 715 8.95% 2
chrUn_KI270465v1 1069 60.26% 2
chrUn_KI270468v1 473 11.66% 1
chrUn_KI270507v1 913 17.06% 2
chrUn_KI270508v1 982 50.33% 2
chrUn_KI270509v1 724 31.23% 2
chrUn_KI270510v1 1306 54.08% 2
chrUn_KI270511v1 531 6.53% 2
chrUn_KI270512v1 11340 49.98% 15
chrUn_KI270515v1 2421 38.06% 5
chrUn_KI270517v1 858 26.38% 2
chrUn_KI270518v1 1737 79.46% 1
chrUn_KI270519v1 46105 33.38% 52
chrUn_KI270521v1 543 7.11% 2
chrUn_KI270522v1 473 8.34% 1
chrUn_KI270529v1 843 44.39% 3
chrUn_KI270538v1 3441 3.77% 8
chrUn_KI270580v1 1333 85.83% 1
chrUn_KI270581v1 252 3.58% 1
chrUn_KI270583v1 380 27.14% 1
chrUn_KI270584v1 3640 80.66% 6
chrUn_KI270588v1 1653 26.84% 3
chrUn_KI270589v1 5256 11.82% 5
chrUn_KI270590v1 3515 75.03% 4
chrUn_KI270591v1 964 16.63% 1
chrUn_KI270741v1 3837 2.44% 7
chrUn_KI270742v1 2502 1.34% 5
chrUn_KI270743v1 5425 2.58% 14
chrUn_KI270744v1 18908 11.22% 21
chrUn_KI270746v1 470 0.71% 1
chrUn_KI270747v1 6973 3.51% 12
chrUn_KI270749v1 4405 2.77% 4
chrUn_KI270750v1 1670 1.12% 4
chrUn_KI270751v1 11150 7.40% 20
chrUn_KI270753v1 4053 6.44% 10
chrUn_KI270754v1 16555 41.19% 18
chrUn_KI270755v1 311 0.85% 1
chrUn_KI270756v1 76730 96.41% 19
chrUn_KI270757v1 13034 18.29% 18
chrX 8676301 5.56% 13659
chrY 247350 0.43% 410
3254 contigs with no values (118637599 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 199201 250 57252 753.31 449
global segment-length histogram

Files

Filename Size md5
ENCFF904EOT.bed.gz 3.79 MB b50dc5eeff7590f65e023b573e73ebcf
ENCFF904EOT.tabix.bed.gz 1.88 MB 97334eec56b5d32ee3c15eef49068755
ENCFF904EOT.tabix.bed.gz.tbi 507.56 KB e839de7e74d2d1abcda4676fb17d9e13
genomic_resource.yaml 3.12 KB 97aa7c109a95f6b1ca605562dccfbf01
statistics/