Resource

Id Histone_ChIP-seq/ENCSR038PFDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR038PFD [biosample_summary="Homo sapiens H1" and target="H3K18ac"]
Description
Labels
  • accession: ENCSR038PFD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003042/
  • biosample_summary: Homo sapiens H1
  • date_created: 2015-10-01T07:15:56.173846+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR038PFD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K18ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR038PFD float

Histone_ChIP-seq_ENCSR038PFD
Histone_ChIP-seq ENCSR038PFD [biosample_summary="Homo sapiens H1" and target="H3K18ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR038PFD [1.89, 27.2]
n
28,907,120
mean
5.8
sd
2.11

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 289071200.90% 86546
chr1 3042669 1.22% 8867
chr2 2142446 0.88% 6515
chr3 1628612 0.82% 5076
chr4 1081267 0.57% 3443
chr5 1459092 0.80% 4420
chr6 1643151 0.96% 5012
chr7 1474336 0.93% 4490
chr8 1190267 0.82% 3635
chr9 1229242 0.89% 3709
chr10 1420533 1.06% 4172
chr11 1676211 1.24% 4895
chr12 1392556 1.04% 4140
chr13 635820 0.56% 2006
chr14 934126 0.87% 2782
chr15 986815 0.97% 2963
chr16 1141830 1.26% 3310
chr17 1623123 1.95% 4563
chr18 579213 0.72% 1842
chr19 1267722 2.16% 3678
chr20 844553 1.31% 2520
chr21 313190 0.67% 932
chr22 776287 1.53% 2209
chrX 405840 0.26% 1311
chrY 18219 0.03% 56
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 86546 115 2992 334.01 275
global segment-length histogram

Files

Filename Size md5
ENCFF192GAX.bed.gz 1.7 MB e00f4731940abb3e0d422b6772ef8c48
ENCFF192GAX.tabix.bed.gz 843.09 KB ba1b1f58dd61a33a6d651f731e66e5c6
ENCFF192GAX.tabix.bed.gz.tbi 288.51 KB e7fcea91900c96a64f45cbb5f6a89ed7
genomic_resource.yaml 2.08 KB 499f09f3a5c24849f066ef5ec5850390
statistics/